{"id":"W2972241488","doi":"10.1101/19003855","title":"Identifying 31 novel breast cancer susceptibility loci using data from genome-wide association studies conducted in Asian and European women","year":2019,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec; University of British Columbia; Queen's University","funders":"","keywords":"Genome-wide association study; Breast cancer; Expression quantitative trait loci; Genetic association; Single-nucleotide polymorphism; Biology; Locus (genetics); Genetics; Quantitative trait locus; Oncology; MUTYH; Medicine; Cancer; Gene; Genotype; Germline mutation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005739967,0.0006795032,0.00106579,0.002968762,0.0004971545,0.001303592,0.0006547484,0.0006007611,0.001569001],"category_scores_gemma":[0.007534548,0.0003830394,0.00308837,0.005728397,0.0003672128,0.0004334447,0.001004972,0.0004747993,0.0002409149],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003051825,"about_ca_system_score_gemma":0.000652959,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006172487,"about_ca_topic_score_gemma":0.007842613,"domain_scores_codex":[0.9976788,0.0007159397,0.0005149315,0.0006694822,0.0002743327,0.0001464085],"domain_scores_gemma":[0.9960394,0.00202426,0.0009572985,0.0004423834,0.0003377898,0.0001988822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001056905,0.0000567131,0.9751928,0.0003350587,0.006378786,0.000630573,0.0001974459,0.0005687348,0.006816154,0.0000695671,0.0002811381,0.008416164],"study_design_scores_gemma":[0.0002649924,0.0002280037,0.9867071,0.00007423107,0.006673465,0.0008825762,0.0002921072,0.002182064,0.001360236,0.000287666,0.001017475,0.00003018694],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911344,0.002990726,0.002693688,0.0001099029,0.00001882327,0.00004915322,0.002607703,0.00003998728,0.0003556648],"genre_scores_gemma":[0.995271,0.0005855258,0.001950789,0.00006424983,0.00001417726,0.00006539001,0.001951198,0.00001050118,0.00008718673],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006172487,"threshold_uncertainty_score":0.03035623,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09578413759871111,"score_gpt":0.3436877117128116,"score_spread":0.2479035741141005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}