{"id":"W2972757308","doi":"10.1128/mra.00886-19","title":"Complete Genome Sequence of Rickettsia asiatica Strain Maytaro1284, a Member of Spotted Fever Group Rickettsiae Isolated from an Ixodes ovatus Tick in Japan","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Institute of Genetics; University of Tokyo; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Spotted fever; Tick; Biology; Rickettsia; Virology; Whole genome sequencing; Ixodes; Strain (injury); Genome; Tick-borne disease; Genetics; Gene; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002366826,0.0009429869,0.0008930971,0.001634922,0.0007043247,0.0005876247,0.0005570438,0.0005471934,0.002266582],"category_scores_gemma":[0.0004528512,0.0004132393,0.0007135012,0.002337709,0.000271052,0.0004557417,0.0004972063,0.0009747578,0.001807854],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004721334,"about_ca_system_score_gemma":0.001927978,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008388934,"about_ca_topic_score_gemma":0.006437562,"domain_scores_codex":[0.9998165,0.0000146889,0.00002417157,0.00005595788,0.0000586814,0.00003000856],"domain_scores_gemma":[0.9996212,0.00005024004,0.0001024903,0.00002543539,0.0001068943,0.00009374464],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002675948,0.0002258081,0.01333144,0.003001569,0.0001693435,0.001433935,0.0009754862,0.00112703,0.9274149,0.0004725313,0.01148159,0.03769041],"study_design_scores_gemma":[0.001017469,0.001630879,0.491515,0.0005992752,0.001642659,0.00344105,0.002069674,0.004073515,0.1131337,0.001353834,0.3792365,0.000286485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6150383,0.005418562,0.008728906,0.0006324227,0.0003934032,0.0003195094,0.3621059,0.0004273684,0.006935538],"genre_scores_gemma":[0.1509902,0.002763624,0.01264008,0.0001450565,0.0001144682,0.0002216685,0.8285968,0.0001701692,0.004357872],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008388934,"threshold_uncertainty_score":0.01668024,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02063572271022629,"score_gpt":0.2534935014601711,"score_spread":0.2328577787499448,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}