{"id":"W2972848998","doi":"10.3390/v11090854","title":"Diversity and Host Specificity Revealed by Biological Characterization and Whole Genome Sequencing of Bacteriophages Infecting Salmonella enterica","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada; University of Guelph; Université Laval; Agriculture and Agri-Food Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Genome Canada; Health Canada; Université Laval","keywords":"Biology; Salmonella enterica; Genome; Genetics; Pathogenicity island; Virulence; Salmonella; Bacteriophage; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008198024,0.0001000282,0.0001542086,0.00002222921,0.0002791787,0.00002389721,0.00006746548,0.00005149366,0.0007352204],"category_scores_gemma":[0.00001343627,0.00008883434,0.00002193141,0.00007289086,0.0001137724,0.0003090449,0.0008145028,0.00007276837,0.00004967648],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005370455,"about_ca_system_score_gemma":0.000001881295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006943112,"about_ca_topic_score_gemma":0.00001105931,"domain_scores_codex":[0.9994003,0.00004253017,0.0001466792,0.0002312244,0.0000516916,0.0001276282],"domain_scores_gemma":[0.9997011,0.00003031853,0.0001190403,0.00009506875,0.000006094992,0.00004836026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001204259,0.00001682787,0.279583,0.000007531868,0.000004768734,7.49923e-7,0.0003990368,3.993677e-7,0.7196029,8.255479e-7,0.000005357852,0.0003664843],"study_design_scores_gemma":[0.0001212007,0.00008327042,0.9529793,0.00001579987,0.00000639421,0.000009692156,0.00007800195,0.000009999271,0.04309324,0.000001252521,0.00350554,0.00009634795],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993494,0.00003261436,0.00008685211,0.00002724643,0.00006950604,0.0001408731,0.000119444,0.00002007617,0.0001540265],"genre_scores_gemma":[0.999288,0.0002497495,0.00008302023,0.0001531731,0.00001583408,0.000001235431,0.00001790833,0.00000599498,0.000185115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6765097,"threshold_uncertainty_score":0.8050148,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02200184873203361,"score_gpt":0.2201579635129598,"score_spread":0.1981561147809262,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}