{"id":"W2972848998","doi":"10.3390/v11090854","title":"Diversity and Host Specificity Revealed by Biological Characterization and Whole Genome Sequencing of Bacteriophages Infecting Salmonella enterica","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada; University of Guelph; Université Laval; Agriculture and Agri-Food Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Genome Canada; Health Canada; Université Laval","keywords":"Biology; Salmonella enterica; Genome; Genetics; Pathogenicity island; Virulence; Salmonella; Bacteriophage; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000194915,0.0001877868,0.0003255755,0.001027528,0.000310854,0.0006472443,0.0001699165,0.0002210074,0.0002502672],"category_scores_gemma":[0.000529613,0.0001758505,0.0002321191,0.001035256,0.0003105554,0.0001620151,0.0003349667,0.0003092531,0.0001375351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003534959,"about_ca_system_score_gemma":0.0004996127,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01725159,"about_ca_topic_score_gemma":0.02258335,"domain_scores_codex":[0.9997489,0.00001907945,0.00001666138,0.00008178534,0.00007581087,0.0000577837],"domain_scores_gemma":[0.9995436,0.00008930189,0.0001137515,0.00003377111,0.0001309854,0.00008858521],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001312701,0.00002591308,0.03309962,0.00006838534,0.00002649402,0.00009059344,0.0005273055,0.0002017523,0.9620089,0.00005040774,0.00003715961,0.003732116],"study_design_scores_gemma":[0.000005843248,0.000138493,0.9602607,0.0000190939,0.00005039345,0.0005564129,0.0007756262,0.001120011,0.03527774,0.00007682164,0.001700255,0.00001858644],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981763,0.0002799903,0.0005560017,0.00001569081,0.000001654516,0.000008981854,0.0005776664,0.000009932595,0.0003737184],"genre_scores_gemma":[0.9957242,0.0003326708,0.001529758,0.00004502321,0.000003044214,0.00001466026,0.00199109,0.00001174933,0.0003478295],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01725159,"threshold_uncertainty_score":0.03430235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02200184873203361,"score_gpt":0.2201579635129598,"score_spread":0.1981561147809262,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}