{"id":"W2972870406","doi":"10.1128/aem.02566-19","title":"Viable but Nonculturable Escherichia coli O157:H7 and Salmonella enterica in Fresh Produce: Rapid Determination by Loop-Mediated Isothermal Amplification Coupled with a Propidium Monoazide Treatment","year":2020,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Agriculture and Agri-Food Canada; University of British Columbia","funders":"Center for Produce Safety","keywords":"Viable but nonculturable; Salmonella enterica; Preharvest; Loop-mediated isothermal amplification; Microbiology; Propidium monoazide; Escherichia coli; Biology; Salmonella; Food microbiology; Foodborne pathogen; Bacteria; Food science; Postharvest; Listeria monocytogenes; Real-time polymerase chain reaction","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002560066,0.0001825129,0.000203484,0.00002169681,0.00004847759,0.00001829686,0.00003364595,0.0001078913,0.00003439452],"category_scores_gemma":[0.000001351766,0.0001452315,0.00001338114,0.00006468085,0.0001065744,0.000039855,0.00001653805,0.00009089994,0.00001701386],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007541933,"about_ca_system_score_gemma":0.000003057421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002852579,"about_ca_topic_score_gemma":0.000007822956,"domain_scores_codex":[0.9992848,0.0000157594,0.000165157,0.0003087043,0.00002585406,0.0001996974],"domain_scores_gemma":[0.9998053,0.00001516646,0.00003648716,0.00006875393,0.000001829754,0.0000724565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007453754,0.00006363452,0.0006062457,0.00002543052,0.00002222307,0.000001645822,0.0001592927,0.0001447293,0.9967271,0.000001597253,0.00004977929,0.002123754],"study_design_scores_gemma":[0.003085783,0.0009326886,0.006633145,0.00001694936,0.00006563809,0.00002926296,0.0006378408,0.06378947,0.9174073,0.000007858494,0.006827121,0.0005669069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985096,0.0003070746,0.0004198116,0.0001434443,0.00001547018,0.000419379,0.00006021783,0.00004831291,0.00007664566],"genre_scores_gemma":[0.9985114,0.0006769139,0.0002836947,0.0001276086,0.00002398044,0.00007117472,0.0002395495,0.00002139302,0.00004424167],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0793198,"threshold_uncertainty_score":0.5922367,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004299027354430648,"score_gpt":0.1482595631972083,"score_spread":0.1439605358427776,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}