{"id":"W2973025151","doi":"10.1371/journal.pone.0221960","title":"Isolation of five Enterobacteriaceae species harbouring blaNDM-1 and mcr-1 plasmids from a single paediatric patient","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; Toronto Public Health","funders":"Fondo para la Investigación Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Plasmid; Enterobacter cloacae; Microbiology; Serratia marcescens; Biology; Enterobacteriaceae; Broth microdilution; MCR-1; Colistin; Citrobacter freundii; Whole genome sequencing; Antibiotic resistance; Escherichia coli; Enterobacter; Antimicrobial; Antibiotics; Genome; Gene; Genetics; Minimum inhibitory concentration","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001651421,0.0006021197,0.0005802797,0.0008602085,0.0008461992,0.000759414,0.0002921901,0.0007383888,0.0008972145],"category_scores_gemma":[0.001194353,0.000455738,0.0004122831,0.000742151,0.0003420794,0.0003034151,0.0006448086,0.0007131348,0.0004525095],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003518786,"about_ca_system_score_gemma":0.0005175825,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002477142,"about_ca_topic_score_gemma":0.002609215,"domain_scores_codex":[0.9994988,0.00004378813,0.00006568852,0.0001542667,0.0001382784,0.00009915976],"domain_scores_gemma":[0.9995702,0.0001026159,0.00008862306,0.00004248638,0.00007305622,0.0001230357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"case_report","study_design_scores_codex":[0.0008533765,0.0004381462,0.6405783,0.000429979,0.00007955613,0.1599669,0.004312915,0.0002946786,0.1664177,0.0002271536,0.001219278,0.02518203],"study_design_scores_gemma":[0.00010152,0.001248817,0.420349,0.0001713521,0.0002218618,0.4964197,0.005223711,0.001032974,0.06382573,0.0001230457,0.01121333,0.00006895495],"study_design_candidate":"case_report","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973042,0.0005103275,0.001027961,0.0001140021,0.00002008081,0.00008126603,0.0004588482,0.00001949341,0.0004638359],"genre_scores_gemma":[0.9957644,0.0006169337,0.002329053,0.0001290845,0.00002680201,0.00001663242,0.0007177482,0.00001943429,0.0003798121],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002477142,"threshold_uncertainty_score":0.004925489,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01165322752572478,"score_gpt":0.1787442884176448,"score_spread":0.16709106089192,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}