{"id":"W2973118395","doi":"10.1101/769422","title":"Green, orange, red, and far-red optogenetic tools derived from cyanobacteriochromes","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of Toronto","funders":"","keywords":"Phycocyanobilin; Chromophore; Biliverdin; Optogenetics; Far-red; Orange (colour); Limiting; Chemistry; Protein engineering; Synechocystis; Red light; Biophysics; Phycocyanin; Biology; Photochemistry; Cyanobacteria; Biochemistry; Genetics; Gene; Bacteria; Botany; Heme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001793776,0.000309652,0.0001545089,0.0002709231,0.0001434094,0.0003188517,0.0001736579,0.0002477804,0.001639222],"category_scores_gemma":[0.0001102958,0.00015775,0.0001881645,0.000164989,0.0002601051,0.0001709403,0.0003819761,0.0005258521,0.0005918496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003857884,"about_ca_system_score_gemma":0.0001458338,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004579596,"about_ca_topic_score_gemma":0.0008193041,"domain_scores_codex":[0.9999112,0.00000907132,0.000005450207,0.00002187887,0.00003102541,0.00002133539],"domain_scores_gemma":[0.999935,0.00001777046,0.00001595676,0.00000892422,0.000004669635,0.00001767257],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001151234,0.000003453419,0.00003962641,0.00001278187,0.000001055834,0.000009964241,0.000004423984,0.00005747854,0.9990224,0.0002139442,0.0000307927,0.0005926424],"study_design_scores_gemma":[0.000003489863,0.00001254852,0.0004055446,0.000001942855,0.000002006131,0.00004471193,0.000005203974,0.0003688956,0.9968485,0.00005642553,0.002248783,0.0000020273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9516571,0.001550666,0.03748365,0.0003067905,0.0000704328,0.000059433,0.0007771173,0.0004597462,0.007634999],"genre_scores_gemma":[0.9671208,0.0007092505,0.02112598,0.0001201498,0.000009922211,0.00005850062,0.0009057655,0.0001982337,0.009751457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001639222,"threshold_uncertainty_score":0.005483747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01826480601169538,"score_gpt":0.1981446568988491,"score_spread":0.1798798508871537,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}