{"id":"W2973662529","doi":"10.1101/774265","title":"Identification of gut microbiome markers for schizophrenia delineates a potential role of <i>Streptococcus</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Government of Jiangxi Province; Xi’an Jiaotong University","keywords":"Gut flora; Schizophrenia (object-oriented programming); Biology; Microbiome; Metagenomics; Cohort; Feces; Gut–brain axis; Microbiology; Immunology; Medicine; Bioinformatics; Internal medicine; Genetics; Psychiatry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005281538,0.0006289231,0.0005929484,0.001241559,0.0003680579,0.0008055934,0.0001645999,0.0003541131,0.00159701],"category_scores_gemma":[0.0008688473,0.0002396546,0.0006753989,0.0007974291,0.0002433978,0.0002773648,0.0006443209,0.000450404,0.0002865217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002981997,"about_ca_system_score_gemma":0.0004314653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002725382,"about_ca_topic_score_gemma":0.003443174,"domain_scores_codex":[0.9996854,0.00007087964,0.00003944704,0.00008189846,0.00005951635,0.00006292213],"domain_scores_gemma":[0.9994485,0.00007798794,0.0002797654,0.00003522232,0.0000772397,0.00008138362],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001298664,0.00009669628,0.8316622,0.0001730752,0.0004744992,0.0002457456,0.0001120376,0.0006842758,0.1397749,0.0001276117,0.0003394598,0.02501079],"study_design_scores_gemma":[0.00002401614,0.0005248548,0.9769425,0.00009014755,0.00037929,0.0008112174,0.0003322432,0.004696253,0.01462244,0.0004001668,0.001148292,0.00002852358],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949483,0.001608989,0.001935406,0.0001213515,0.00001649443,0.00001800058,0.0008126507,0.00004170331,0.0004971923],"genre_scores_gemma":[0.9970706,0.0004298203,0.001716054,0.00005814035,0.000009453148,0.000009562208,0.0005351091,0.00001059535,0.0001606164],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002725382,"threshold_uncertainty_score":0.005419016,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005257963512751572,"score_gpt":0.2178460938683488,"score_spread":0.2125881303555973,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}