{"id":"W2973948751","doi":"10.1002/ece3.5257","title":"Historical museum collections clarify the evolutionary history of cryptic species radiation in the world's largest amphibians","year":2019,"lang":"en","type":"article","venue":"Ecology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum","funders":"Natural Environment Research Council; Royal Society; Zoological Society of London","keywords":"Biology; Population; Allopatric speciation; Ecology; Amphibian; Salamander; Clade; Threatened species; Phylogenetic tree; Habitat","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002353377,0.00007582713,0.0001067765,0.00007586144,0.0001268696,0.000003058427,0.00009627447,0.0001454272,0.00002529146],"category_scores_gemma":[0.00004921609,0.00005542797,0.00004621967,0.0001313905,0.0001313591,0.000001573525,0.00004102611,0.0001440144,0.000004574139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000318494,"about_ca_system_score_gemma":0.0001099418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001085948,"about_ca_topic_score_gemma":0.001188855,"domain_scores_codex":[0.9993537,0.000132713,0.0001618398,0.0001617938,0.00005597778,0.0001339768],"domain_scores_gemma":[0.9996374,0.00006858074,0.00007521734,0.000168565,0.00003665611,0.00001358982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001321634,0.0001945671,0.7445765,0.00002224538,0.00007193045,9.819865e-7,0.0006671174,0.0007292791,0.08087683,0.006786885,0.1658876,0.000053848],"study_design_scores_gemma":[0.0002252292,0.0001717747,0.7405036,0.000001768292,0.0000155727,0.000007384713,0.0001242448,0.00009004065,0.00004682117,0.0003645752,0.2583947,0.00005430646],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9817263,0.009084403,0.00004051432,0.002304486,0.000960772,0.0002728533,0.000005072835,0.000002313457,0.005603225],"genre_scores_gemma":[0.9886521,0.0004005778,0.00004606352,0.0001807062,0.000141029,0.00003209344,0.000009200752,0.000004729693,0.01053352],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09250706,"threshold_uncertainty_score":0.2260287,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008663821931796956,"score_gpt":0.1941677182503624,"score_spread":0.1855038963185655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}