{"id":"W2974214501","doi":"10.1021/acs.jproteome.9b00304","title":"Distinct Gut Microbiota and Serum Metabolites in Response to Weight Loss Induced by Either Dairy or Exercise in a Rodent Model of Obesity","year":2019,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Children's Hospital; University of Guelph; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Alberta Innovates - Health Solutions; Dairy Farmers of Canada","keywords":"Gut flora; Lactobacillus; Weight gain; Obesity; Biology; Metabolite; Feces; Skimmed milk; Metabolomics; Food science; Endocrinology; Internal medicine; Immunology; Body weight; Microbiology; Medicine; Bioinformatics; Fermentation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003341052,0.0001269787,0.0003673817,0.0004004064,0.00003250256,0.00002226109,0.0003028972,0.0001750494,0.00003114119],"category_scores_gemma":[0.0002267978,0.00009512727,0.00005444989,0.0003327003,0.00006207198,0.00001264743,0.0002596772,0.0004576955,0.000005771324],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007377363,"about_ca_system_score_gemma":0.0005876063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000996338,"about_ca_topic_score_gemma":0.00009474987,"domain_scores_codex":[0.998139,0.0004289837,0.0004912252,0.000259878,0.0002712651,0.0004097011],"domain_scores_gemma":[0.9991084,0.00004417485,0.0001375292,0.0002721995,0.0002702961,0.0001673513],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005652694,0.0002559585,0.03203461,0.0001846895,0.00001217786,0.00001220344,0.0003075305,0.00001380261,0.9609671,0.000002043564,0.000285251,0.0002719994],"study_design_scores_gemma":[0.002849774,0.001314253,0.3473255,0.0007022427,0.000007735315,0.00004434113,0.0001807081,0.0001149327,0.6460558,0.00007030006,0.001129861,0.0002045725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969651,0.001323144,0.00002227319,0.0008522714,0.00002659052,0.0007522251,0.00004464986,8.718553e-7,0.00001288181],"genre_scores_gemma":[0.9974183,0.0006392677,0.000920033,0.00002773692,0.00002729528,0.00001173789,0.000002703238,0.00001808805,0.0009348583],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3152909,"threshold_uncertainty_score":0.3879178,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03368518346323164,"score_gpt":0.3481947662189195,"score_spread":0.3145095827556879,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}