{"id":"W2974984530","doi":"10.1073/pnas.1907517116","title":"A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators","year":2019,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":180,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Japan Society for the Promotion of Science; GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel; Joint Genome Institute; Sight Research UK; Canon Foundation in Europe; Natural Environment Research Council; Gordon and Betty Moore Foundation; U.S. Department of Energy","keywords":"Biology; Giant Virus; Horizontal gene transfer; Lineage (genetic); Genome; Rhodopsin; Evolutionary biology; Gene; Genetics; Botany; Retinal","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009514651,0.0002767,0.0002505183,0.0004228768,0.0004399609,0.0006264544,0.0001873071,0.0004208798,0.0005453793],"category_scores_gemma":[0.0002588918,0.0002262716,0.0003240875,0.0003049326,0.0002779467,0.0004913953,0.0007335435,0.0005598382,0.000260983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003203371,"about_ca_system_score_gemma":0.0003400331,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001268737,"about_ca_topic_score_gemma":0.001644818,"domain_scores_codex":[0.9998829,0.000007169577,0.000006158322,0.00005241217,0.00002799194,0.00002321738],"domain_scores_gemma":[0.9998505,0.00001830292,0.00004043561,0.0000212435,0.00001843395,0.00005108718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007603224,0.0000124812,0.01901901,0.00007702686,0.00001858516,0.00024054,0.0003415458,0.0001042118,0.9693896,0.001131559,0.0001201398,0.009469263],"study_design_scores_gemma":[0.00005360959,0.0006832492,0.4791371,0.0001544698,0.0001909081,0.009818566,0.002042046,0.005487084,0.4112494,0.004455311,0.08661362,0.0001145416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910891,0.002342642,0.003380269,0.0001315546,0.00002799368,0.00001849772,0.0003325253,0.0001354024,0.002542007],"genre_scores_gemma":[0.9848254,0.001517772,0.00933061,0.0001544784,0.00002097418,0.00002028797,0.00137489,0.00004408571,0.002711528],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001268737,"threshold_uncertainty_score":0.002522707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07779348969629077,"score_gpt":0.339760058303632,"score_spread":0.2619665686073412,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}