{"id":"W2975210235","doi":"10.1373/clinchem.2019.310714","title":"Whither Extensive Genomic-Based Microbial Taxonomic Revision?","year":2019,"lang":"en","type":"letter","venue":"Clinical Chemistry","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Computational biology; Biology; Evolutionary biology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0437693,0.0008622536,0.001198756,0.004765492,0.002116061,0.00755565,0.002967618,0.005759455,0.004377157],"category_scores_gemma":[0.09926009,0.0004740863,0.0008247992,0.002443623,0.005577592,0.01608889,0.005199789,0.007497569,0.002260969],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002537357,"about_ca_system_score_gemma":0.005560834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002104036,"about_ca_topic_score_gemma":0.004114985,"domain_scores_codex":[0.9847514,0.005318093,0.001668931,0.002630704,0.004891451,0.0007392956],"domain_scores_gemma":[0.890339,0.04523984,0.005653296,0.01384493,0.03876856,0.006154518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002735537,0.00010798,0.005436404,0.002127139,0.0002501037,0.0004743642,0.001761396,0.0005070812,0.00246859,0.01954806,0.1557617,0.8112836],"study_design_scores_gemma":[0.00007432049,0.0002461477,0.01006523,0.005332924,0.0002128744,0.001655039,0.004948469,0.001376191,0.001632102,0.08330564,0.8910019,0.0001491922],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.01309945,0.1511689,0.02833482,0.7079171,0.09384825,0.00007836808,0.0005056112,0.0004851926,0.004562394],"genre_scores_gemma":[0.1660214,0.1268724,0.09740321,0.4816093,0.1203592,0.0002437082,0.002166405,0.000667488,0.004656823],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.0437693,"threshold_uncertainty_score":0.231477,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0568771714351433,"score_gpt":0.3475432913997648,"score_spread":0.2906661199646215,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}