{"id":"W2975914829","doi":"10.1038/s41396-019-0508-7","title":"Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria)","year":2019,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Vienna Science and Technology Fund; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft; Universität Bremen; European Commission; Gordon and Betty Moore Foundation; National Science Foundation","keywords":"Biology; Betaproteobacteria; Gammaproteobacteria; Autotroph; Carbon fixation; Candidatus; Carbon cycle; Gene; Ecology; Bacteria; Biochemistry; Genetics; 16S ribosomal RNA; Ecosystem; Actinobacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008984163,0.0004186919,0.0001989808,0.0005730698,0.0003726647,0.0004829995,0.000251442,0.0003125232,0.0008997383],"category_scores_gemma":[0.0002827767,0.0002303692,0.0002432468,0.0003538899,0.0003397182,0.0003782569,0.0006424442,0.0002603515,0.0002364745],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003501689,"about_ca_system_score_gemma":0.0003158441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003860298,"about_ca_topic_score_gemma":0.004461078,"domain_scores_codex":[0.9998237,0.000007271211,0.000007442166,0.00008895685,0.00003241689,0.00004024533],"domain_scores_gemma":[0.9997668,0.00002764864,0.00007070474,0.00003683612,0.00005314102,0.0000449587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001191641,0.00003146075,0.08472421,0.0001055257,0.0000280918,0.000241407,0.0002694601,0.00008723427,0.9004418,0.0001485328,0.00005335602,0.01374963],"study_design_scores_gemma":[0.00001800135,0.0003853226,0.8118604,0.00006174358,0.00009793782,0.001535601,0.0008176088,0.001393479,0.1779201,0.000401578,0.005471827,0.00003637338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972651,0.0004084047,0.000853764,0.00002648352,0.000006868795,0.00001127525,0.0001615239,0.00003744083,0.001229116],"genre_scores_gemma":[0.997606,0.0001819724,0.00100905,0.00003188193,0.000004871905,0.0000112387,0.0002739101,0.000006802078,0.0008742259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003860298,"threshold_uncertainty_score":0.007675648,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002458481472568958,"score_gpt":0.1783278706184495,"score_spread":0.1758693891458805,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}