{"id":"W2976340293","doi":"10.3390/genes10100739","title":"Genomic Analyses Identify Novel Molecular Signatures Specific for the Caenorhabditis and other Nematode Taxa Providing Novel Means for Genetic and Biochemical Studies","year":2019,"lang":"en","type":"article","venue":"Genes","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Caenorhabditis; Caenorhabditis elegans; Phylogenetic tree; Clade; Evolutionary biology; Phylum; Indel; Genome; Phylogenetics; Nematode; Genetics; Computational biology; Gene; Ecology; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007542421,0.0002284137,0.0001955451,0.0008048905,0.0001543472,0.0002908175,0.0001188932,0.0002569886,0.0007434202],"category_scores_gemma":[0.0002735138,0.0001336867,0.0002447435,0.0007702037,0.0002156003,0.0002050773,0.0001879896,0.0003130008,0.0003121051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001568486,"about_ca_system_score_gemma":0.0002611291,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001188658,"about_ca_topic_score_gemma":0.002532847,"domain_scores_codex":[0.999899,0.000005549542,0.000008505611,0.00004684506,0.00002383954,0.00001624595],"domain_scores_gemma":[0.9997999,0.00003231756,0.0001025746,0.0000149395,0.000019719,0.00003055338],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009456591,0.00001925232,0.01518385,0.00011979,0.00002236465,0.0002318692,0.00006591107,0.0001325198,0.9787551,0.0001406158,0.00006892084,0.005165293],"study_design_scores_gemma":[0.00001214263,0.0002564928,0.877546,0.00003857184,0.0001312206,0.001518818,0.0003288809,0.001061816,0.1128662,0.0002823359,0.005937421,0.00002011726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896349,0.001590615,0.003889855,0.00006854437,0.00001504563,0.00003651344,0.002987794,0.00006839536,0.001708296],"genre_scores_gemma":[0.9820926,0.001037201,0.01029534,0.00009543771,0.00001546522,0.00003321639,0.005538619,0.00001699623,0.0008751011],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001188658,"threshold_uncertainty_score":0.002487004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08242835940771344,"score_gpt":0.3070995014959052,"score_spread":0.2246711420881918,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}