{"id":"W2977368849","doi":"10.2210/pdb4eqb/pdb","title":"1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES","year":2012,"lang":"en","type":"paratext","venue":"","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"","keywords":"Spermidine; Putrescine; Streptococcus pneumoniae; Microbiology; Strain (injury); Chemistry; Transporter; Calcium; Angstrom; ATP-binding cassette transporter; HEPES; Biochemistry; Biology; Crystallography; Gene; Enzyme; Antibiotics; Anatomy","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005393238,0.0009394205,0.001616092,0.0006472681,0.001713445,0.001142557,0.002220017,0.001478447,0.009994152],"category_scores_gemma":[0.0009189038,0.0006656176,0.0004860918,0.001177158,0.0004337518,0.0008548615,0.0004638026,0.003519076,0.0009880371],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002414279,"about_ca_system_score_gemma":0.002773905,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05089012,"about_ca_topic_score_gemma":0.06581674,"domain_scores_codex":[0.9997179,0.00002291013,0.0000132918,0.00003649483,0.0001538051,0.00005544086],"domain_scores_gemma":[0.9994389,0.0002433543,0.00007159033,0.00001499026,0.000135186,0.00009586572],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.008480773,0.003151073,0.03163074,0.007112837,0.001217222,0.008218295,0.00336951,0.03989477,0.4118444,0.02248232,0.392025,0.07057314],"study_design_scores_gemma":[0.004907066,0.002741836,0.3208422,0.001596646,0.001364007,0.005800427,0.00683967,0.2338579,0.1173433,0.01040976,0.2934456,0.0008516174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.832907,0.0281843,0.008554704,0.008812675,0.003253564,0.0002660593,0.05565242,0.003423548,0.05894577],"genre_scores_gemma":[0.8711267,0.01245605,0.02078488,0.001608025,0.0003683922,0.000285281,0.0745679,0.0004946945,0.01830813],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05089012,"threshold_uncertainty_score":0.1011878,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.011638832981367,"score_gpt":0.2184063528049235,"score_spread":0.2067675198235565,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}