{"id":"W2977750151","doi":"10.1093/mutage/gez023","title":"5-Hydroxymethylcytosine in cord blood and associations of DNA methylation with sex in newborns","year":2019,"lang":"en","type":"article","venue":"Mutagenesis","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institute of Environmental Health Sciences; National Institutes of Health; U.S. Environmental Protection Agency","keywords":"DNA methylation; Epigenetics; Cord blood; 5-Methylcytosine; Methylation; CpG site; Bisulfite sequencing; Biology; Epigenome; Bisulfite; Genetics; Medicine; DNA; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002813641,0.00009702527,0.0001701843,0.0001180544,0.00001472709,0.000008347683,0.00005601785,0.0001149289,0.00001088229],"category_scores_gemma":[0.00004592039,0.00009391401,0.00002431111,0.0002203414,0.00002220763,0.000005009709,0.00003367623,0.00004390426,0.000001270669],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001201099,"about_ca_system_score_gemma":0.00003997498,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000186257,"about_ca_topic_score_gemma":0.0006338324,"domain_scores_codex":[0.9992329,0.00007827327,0.0002219544,0.0002329233,0.0001032284,0.0001307117],"domain_scores_gemma":[0.9996108,0.00003326684,0.000105449,0.0001796399,0.00004238163,0.00002849567],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001985299,0.00004594256,0.4140654,0.00001068711,0.00001550252,6.704869e-7,0.00005965802,0.0004579607,0.5827531,0.00001559375,8.901284e-7,0.002554777],"study_design_scores_gemma":[0.0006846796,0.0002208235,0.4782364,0.000008795615,0.00001505954,4.220161e-7,0.00004211999,0.0001262115,0.5203568,0.00005278253,0.0001706193,0.00008532239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997899,0.0008558066,0.0003362901,0.00003805623,0.00002466511,0.0002115565,0.00001662823,0.00000351339,0.0006144955],"genre_scores_gemma":[0.9983051,0.0002145769,0.001153689,0.00001823402,0.00002157026,0.00001054226,0.00007387232,0.00001497238,0.0001873863],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06417102,"threshold_uncertainty_score":0.3829702,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073298119065269,"score_gpt":0.2503198195495374,"score_spread":0.2395868383588847,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}