{"id":"W2977817742","doi":"10.14309/00000434-201510001-01818","title":"Trimethylamine-N-oxide: A Novel Biomarker for the Identification of Inflammatory Bowel Disease","year":2015,"lang":"en","type":"article","venue":"The American Journal of Gastroenterology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Trimethylamine N-oxide; Inflammatory bowel disease; Biomarker; Ulcerative colitis; Medicine; Population; Choline; Microbiome; Internal medicine; Crohn's disease; Dysbiosis; Gut flora; Trimethylamine; Disease; Gastroenterology; Immunology; Biology; Bioinformatics; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007153671,0.0005176009,0.0005236918,0.001602782,0.0002390075,0.0007035777,0.000407086,0.001153467,0.00126208],"category_scores_gemma":[0.0008923124,0.000182484,0.000266213,0.0009654721,0.0002792514,0.0004347554,0.0003642008,0.0005114448,0.0005799931],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002962711,"about_ca_system_score_gemma":0.0002097211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007802274,"about_ca_topic_score_gemma":0.001253918,"domain_scores_codex":[0.9996569,0.00009376122,0.00002745912,0.00009213433,0.00009794768,0.00003178319],"domain_scores_gemma":[0.9994716,0.0001007104,0.0002215085,0.00002332254,0.0001084697,0.00007446363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002818937,0.0003159562,0.745332,0.000868179,0.0005352818,0.0008507537,0.0001747441,0.000285501,0.1634986,0.0002742693,0.002001094,0.08304469],"study_design_scores_gemma":[0.0001307605,0.002956484,0.9081615,0.0004446004,0.0006535053,0.009956813,0.0004256456,0.005087628,0.05891838,0.00104483,0.01215259,0.0000672953],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9214183,0.06469288,0.00689182,0.0007807876,0.0002435867,0.0001092239,0.001892082,0.0002970513,0.003674216],"genre_scores_gemma":[0.9785871,0.008446828,0.009087735,0.0004066025,0.0001817411,0.00009387752,0.001003912,0.00001535418,0.002176911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001602782,"threshold_uncertainty_score":0.004222035,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0190623923123539,"score_gpt":0.2867928685215165,"score_spread":0.2677304762091626,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}