{"id":"W2978072747","doi":"10.1007/s00792-019-01135-2","title":"Proto-dolomite formation in microbial consortia dominated by Halomonas strains","year":2019,"lang":"en","type":"article","venue":"Extremophiles","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"University of Toronto Scarborough; Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences; Kuwait University; University of Toronto; Kuwait Foundation for the Advancement of Sciences","keywords":"Dolomite; Halomonas; Microbial population biology; Extracellular polymeric substance; Sabkha; Microbial ecology; Metagenomics; Microbial mat; Biology; Ecology; Halophile; Microcosm; Environmental chemistry; Mineralogy; Chemistry; Bacteria; Sedimentary rock; Biofilm","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001836532,0.0001267089,0.0001726423,0.00003934017,0.00008395853,0.00001206195,0.000254037,0.0001411069,0.009072886],"category_scores_gemma":[0.00001793948,0.0001244848,0.00003837848,0.0001347343,0.0001746436,0.0002344039,0.0001482075,0.0002431649,0.002043807],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008966494,"about_ca_system_score_gemma":0.000007076663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002879744,"about_ca_topic_score_gemma":0.001270709,"domain_scores_codex":[0.9990492,0.0002112629,0.0002245384,0.0001974196,0.00005441042,0.0002631587],"domain_scores_gemma":[0.9995815,0.0000573125,0.00008609622,0.0002322974,0.000004741531,0.0000380752],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006319694,0.0001131626,0.00891448,0.00001046618,0.000004246303,0.00000392833,0.0005712523,0.0001058864,0.9700694,0.00007627682,0.01896746,0.001100216],"study_design_scores_gemma":[0.008347928,0.0008958374,0.5875285,0.0001722392,0.00003266329,0.0002005352,0.000882003,0.003324967,0.184573,0.01208241,0.2000798,0.001880158],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9856393,0.00002520306,0.00001545355,0.0002676479,0.00009925199,0.0006767511,0.00002946895,0.00002797993,0.01321895],"genre_scores_gemma":[0.9981952,0.00001137283,0.0001402929,0.0003524288,0.00001323748,0.00002067755,0.0001721097,0.000009097559,0.001085628],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7854965,"threshold_uncertainty_score":0.9987332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007747099078546422,"score_gpt":0.2130626190013866,"score_spread":0.2053155199228402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}