{"id":"W2978329421","doi":"10.1093/jas/skz279","title":"A targeted genotyping approach to enhance the identification of variants for lactation persistency in dairy cows","year":2019,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; McGill University; Agriculture and Agri-Food Canada; Dalhousie University","funders":"","keywords":"Single-nucleotide polymorphism; Genotyping; Biology; SNP genotyping; Genetics; SNP; Candidate gene; Genome-wide association study; Genetic association; Selection (genetic algorithm); Dominance (genetics); Genotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001197466,0.0005090653,0.0009210237,0.001623905,0.0002906465,0.0005877908,0.0005395997,0.0007444967,0.002063068],"category_scores_gemma":[0.002428893,0.0003953729,0.0009525343,0.001242529,0.0001495849,0.0002088903,0.0005350352,0.0005313407,0.0007846596],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001858809,"about_ca_system_score_gemma":0.0003052383,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001179578,"about_ca_topic_score_gemma":0.003262772,"domain_scores_codex":[0.9984264,0.0004599603,0.00009045985,0.0006730402,0.0002238866,0.0001262584],"domain_scores_gemma":[0.9989304,0.0004743,0.0002939,0.000132939,0.0001145515,0.00005393837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001944738,0.0003645026,0.1854393,0.0006772385,0.00196292,0.001323558,0.0008774931,0.00396403,0.6388641,0.001296885,0.00173353,0.1615517],"study_design_scores_gemma":[0.0004322996,0.002489419,0.8335151,0.0001332699,0.003183812,0.005852325,0.0002741453,0.03839434,0.09569589,0.002625559,0.01722804,0.0001758508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8377406,0.002177808,0.1515686,0.0002203139,0.00008791744,0.0002622263,0.005000114,0.0008144123,0.002128012],"genre_scores_gemma":[0.8509924,0.0006142501,0.1407845,0.0005602778,0.0000703094,0.0005158214,0.003991062,0.000140907,0.002330492],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002063068,"threshold_uncertainty_score":0.006901622,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01326591664594511,"score_gpt":0.2755636120427521,"score_spread":0.262297695396807,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}