{"id":"W2979223145","doi":"10.1172/jci.insight.130848","title":"Transmission and clearance of potential procarcinogenic bacteria during fecal microbiota transplantation for recurrent Clostridioides difficile","year":2019,"lang":"en","type":"article","venue":"JCI Insight","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; Bloomberg~Kimmel Institute for Cancer Immunotherapy, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University; Crohn's and Colitis Foundation; Johns Hopkins University; Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey; School of Medicine, Stanford University; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Crohn's and Colitis Foundation of America","keywords":"Clostridioides; Bacteroides fragilis; Microbiology; Fusobacterium nucleatum; Feces; Bacteroidaceae; Transplantation; Bacteria; Fecal bacteriotherapy; Clostridium difficile; Biology; C difficile; Medicine; Bacteroides; Internal medicine; Antibiotics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004481315,0.0002994687,0.0003098761,0.0002498857,0.0004674198,0.000511824,0.0001688515,0.0002992743,0.0006052052],"category_scores_gemma":[0.001135862,0.0001059282,0.0001618319,0.0001672585,0.0002191964,0.0002680542,0.0003021951,0.0005524568,0.0001401991],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005485232,"about_ca_system_score_gemma":0.0003167064,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004934669,"about_ca_topic_score_gemma":0.0006070955,"domain_scores_codex":[0.99976,0.00004657134,0.00001888188,0.00003575284,0.00005171497,0.00008709645],"domain_scores_gemma":[0.9993908,0.00008551747,0.0002745578,0.00003098325,0.00004865515,0.0001694404],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00384333,0.0009898905,0.7619839,0.0001606714,0.00005425782,0.01898553,0.001591545,0.0004243216,0.1467146,0.000250244,0.000506078,0.06449571],"study_design_scores_gemma":[0.0001251049,0.01184134,0.876823,0.00005644907,0.0001116173,0.0536872,0.001145394,0.001972646,0.05225347,0.0001528522,0.001802723,0.00002815863],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994738,0.0001901119,0.0001764315,0.00001649873,0.000003349003,0.000006105579,0.00000767872,0.000007220358,0.000118888],"genre_scores_gemma":[0.9996058,0.0000610385,0.0001675234,0.00002010588,0.000006676387,0.000005792492,0.00003671901,0.000001875288,0.00009454812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006052052,"threshold_uncertainty_score":0.003979862,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01211908744386372,"score_gpt":0.2594219131419671,"score_spread":0.2473028256981034,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}