{"id":"W2979441047","doi":"10.1016/j.chom.2019.09.011","title":"Not Just a Passing Phage","year":2019,"lang":"en","type":"letter","venue":"Cell Host & Microbe","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Computational biology; Virology; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00008184878,0.0004748606,0.0004015527,0.00006906491,0.000203378,0.000224892,0.0005931584,0.0006784054,0.02799544],"category_scores_gemma":[0.000006347926,0.0004677793,0.0003012228,0.000147786,0.000180291,0.000252598,0.0005100256,0.001746663,0.033341],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004039027,"about_ca_system_score_gemma":0.00002945941,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006082496,"about_ca_topic_score_gemma":0.0000343439,"domain_scores_codex":[0.9979188,0.00006733154,0.0003602942,0.0007825783,0.0001792672,0.0006916932],"domain_scores_gemma":[0.9988698,0.0000724911,0.000266744,0.000717042,0.00001175029,0.00006215138],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000002864412,0.00002367751,0.000009109152,0.00004114088,0.000007596143,0.00008301877,0.00008500379,0.000001521401,0.4778144,5.084184e-8,0.521515,0.0004166424],"study_design_scores_gemma":[0.0002162089,0.00003072569,0.0005407927,0.00007037364,0.00007099858,0.0000671419,0.0000179919,0.000004893023,0.08230124,6.67305e-7,0.9161891,0.000489926],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.1105188,0.0006033327,0.0004648253,0.5659552,0.01249575,0.002214779,0.001299314,0.0004578707,0.3059901],"genre_scores_gemma":[0.01749378,0.00007827196,0.0007153762,0.7257466,0.001843977,0.00001864269,0.0004803162,0.0001599519,0.2534631],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.3955131,"threshold_uncertainty_score":0.9997774,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01398275952209451,"score_gpt":0.2272024922665197,"score_spread":0.2132197327444252,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}