{"id":"W2979926659","doi":"10.1099/ijsem.0.003719","title":"Emendation of the Genus Auritidibacter Yassin et al. 2011 and Auritidibacter ignavus Yassin et al. 2011 based on features observed from Canadian and Swiss clinical isolates and whole-genome sequencing analysis","year":2019,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Saint-Boniface; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Biology; 16S ribosomal RNA; Whole genome sequencing; Genome; Accession number (library science); Genetics; Gene; DNA sequencing; Ribosomal RNA; Sequence analysis; GenBank","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006361395,0.0001604563,0.0004169193,0.0001449871,0.00007297838,0.00003434376,0.000159822,0.0001223535,0.00002666339],"category_scores_gemma":[0.00006107998,0.0001147656,0.0001189457,0.00003097705,0.0001755448,0.000009552737,0.0001033183,0.0001439914,0.000001595581],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003878048,"about_ca_system_score_gemma":0.000165228,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001270943,"about_ca_topic_score_gemma":0.001561086,"domain_scores_codex":[0.9985669,0.0003481602,0.0006110898,0.0002652995,0.00007388663,0.0001346623],"domain_scores_gemma":[0.9988863,0.0001592885,0.0004624467,0.0001512276,0.0002580911,0.0000826708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001820412,0.00005289383,0.2388679,0.0001875711,0.001975581,0.000005389003,0.0002270219,0.0001710823,0.7545414,0.00006052538,0.003667188,0.00006142274],"study_design_scores_gemma":[0.001349273,0.0004214243,0.9893902,0.0006013819,0.0003583049,0.0003173986,0.0003639977,0.0005131295,0.0008312838,0.0001639426,0.005446003,0.0002436826],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9846287,0.005662552,0.00007754685,0.00854858,0.000324242,0.0001947429,0.0005382837,8.719771e-7,0.0000245214],"genre_scores_gemma":[0.9949366,0.0009453769,0.0005406517,0.003274103,0.00004782582,0.000003872877,0.0001719929,0.000009279175,0.00007028312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7537102,"threshold_uncertainty_score":0.4680004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01988017354795782,"score_gpt":0.256834067395039,"score_spread":0.2369538938470812,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}