{"id":"W2980175086","doi":"10.1093/glycob/cwz082","title":"N-glycosylation of the CmeABC multidrug efflux pump is needed for optimal function in Campylobacter jejuni","year":2019,"lang":"en","type":"article","venue":"Glycobiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Alberta Innovates - Technology Futures","keywords":"Campylobacter jejuni; Complementation; Glycosylation; Efflux; Mutant; Microbiology; Campylobacter; N-linked glycosylation; Phenotype; Escherichia coli; Autoinducer; Biology; Wild type; Chemistry; Bacteria; Biochemistry; Biofilm; Genetics; Glycoprotein; Quorum sensing; Gene; Glycan","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003810246,0.0001614626,0.0003411022,0.00002211114,0.00006341124,0.000007525476,0.0002869781,0.0002967336,0.0005882619],"category_scores_gemma":[0.0001123432,0.00005814004,0.0001834165,0.0002494147,0.00008518485,0.00007091837,0.00008704148,0.0001407104,0.00007652113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003479133,"about_ca_system_score_gemma":0.00001160824,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007893717,"about_ca_topic_score_gemma":0.0005924975,"domain_scores_codex":[0.9985976,0.0002186429,0.0003946695,0.0003636694,0.00006583647,0.0003595533],"domain_scores_gemma":[0.9989338,0.0006138421,0.0002105883,0.0001293686,0.00007449843,0.0000378834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004548259,0.0000991866,0.5430874,0.00001465182,0.00002674864,1.75671e-7,0.0001559832,0.00007864544,0.4476007,0.0005801501,0.0009266293,0.006974904],"study_design_scores_gemma":[0.0007516203,0.0006745842,0.9561787,0.00001723153,0.00001942389,0.000007962281,0.0003091687,0.0006411655,0.01131083,0.0009269742,0.02897197,0.000190344],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963749,0.00004482798,0.00001903752,0.001449314,0.001003518,0.0006228324,0.00006728077,0.00002401308,0.0003942777],"genre_scores_gemma":[0.9980003,0.00001201065,0.00005362176,0.001110239,0.0001957728,0.00003927186,0.0001181742,0.000001682955,0.0004689127],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4362898,"threshold_uncertainty_score":0.6441056,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01327454209461458,"score_gpt":0.2147727729809193,"score_spread":0.2014982308863047,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}