{"id":"W2980175086","doi":"10.1093/glycob/cwz082","title":"N-glycosylation of the CmeABC multidrug efflux pump is needed for optimal function in Campylobacter jejuni","year":2019,"lang":"en","type":"article","venue":"Glycobiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Alberta Innovates - Technology Futures","keywords":"Campylobacter jejuni; Complementation; Glycosylation; Efflux; Mutant; Microbiology; Campylobacter; N-linked glycosylation; Phenotype; Escherichia coli; Autoinducer; Biology; Wild type; Chemistry; Bacteria; Biochemistry; Biofilm; Genetics; Glycoprotein; Quorum sensing; Gene; Glycan","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008380906,0.0002441281,0.0002293601,0.0000804127,0.0001535176,0.0003047647,0.0001508576,0.0003028204,0.0005081359],"category_scores_gemma":[0.0002792232,0.0001312574,0.0002247997,0.00008189886,0.0002184311,0.0001920646,0.0002641817,0.0003746367,0.0002577551],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003686142,"about_ca_system_score_gemma":0.0003374664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001818967,"about_ca_topic_score_gemma":0.001263327,"domain_scores_codex":[0.9998978,0.00001565627,0.000009725518,0.00001604778,0.00003939696,0.00002120071],"domain_scores_gemma":[0.999814,0.00002683024,0.00005883687,0.00001959904,0.00003123742,0.0000494687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006828953,0.00001888305,0.0005972901,0.0000204131,0.000002894272,0.00009181609,0.00001251501,0.00008766568,0.9984801,0.00004214963,0.00002699767,0.0005509583],"study_design_scores_gemma":[0.00001620204,0.000234701,0.05011237,0.00001636758,0.00001947937,0.001085398,0.0001477875,0.00323164,0.942647,0.0001579844,0.002311063,0.00002005666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984989,0.0002035691,0.0007038423,0.00009989854,0.000009561816,0.00000463414,0.00007104481,0.00002320033,0.0003853905],"genre_scores_gemma":[0.9983414,0.000095308,0.0008827762,0.00003703376,0.000002450238,0.000004422347,0.0001386354,0.00001282271,0.0004851281],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001818967,"threshold_uncertainty_score":0.00361675,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01327454209461458,"score_gpt":0.2147727729809193,"score_spread":0.2014982308863047,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}