{"id":"W2980494997","doi":"10.1128/iai.00656-19","title":"A Loss-of-Function Mutation in the Integrin Alpha L (<i>Itgal</i>) Gene Contributes to Susceptibility to Salmonella enterica Serovar Typhimurium Infection in Collaborative Cross Strain CC042","year":2019,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; McGill University","funders":"Canadian Institutes of Health Research; AgroParisTech; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Salmonella enterica; Biology; Salmonella; Serotype; Microbiology; Gene; Bacteria; Strain (injury); Enterobacteriaceae; Virology; Salmonella infection; Genetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003159311,0.0009350896,0.0002595658,0.000874174,0.0002681534,0.0003642415,0.0003934659,0.0007964251,0.003839891],"category_scores_gemma":[0.0004070193,0.0003403341,0.0005100276,0.0002751592,0.0005113917,0.0001616534,0.0004878487,0.00104396,0.0005373645],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002700991,"about_ca_system_score_gemma":0.0001988577,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001554454,"about_ca_topic_score_gemma":0.001309427,"domain_scores_codex":[0.99962,0.00008609868,0.00004342111,0.0001067016,0.00006555711,0.00007835293],"domain_scores_gemma":[0.9991026,0.0001687936,0.0002992901,0.00007064065,0.00004567284,0.0003130282],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006775252,0.0003417908,0.00369161,0.00002333871,0.00003173066,0.0008997859,0.00006400143,0.00006572482,0.9931871,0.0001214682,0.0001264774,0.0007695307],"study_design_scores_gemma":[0.0005867881,0.006850569,0.2832963,0.0001097699,0.0004012386,0.03092449,0.0007108123,0.00389831,0.6671174,0.0002125595,0.005793379,0.00009833295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984572,0.0001299849,0.0005856955,0.00003860515,0.00001335764,0.00001844126,0.0001492565,0.00001739631,0.0005900661],"genre_scores_gemma":[0.9969106,0.0001476566,0.0006805639,0.00006768516,0.00001783782,0.00002685775,0.0004359509,0.00004130245,0.001671538],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003839891,"threshold_uncertainty_score":0.0128457,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01733391686996255,"score_gpt":0.2785527662152791,"score_spread":0.2612188493453166,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}