{"id":"W2980629165","doi":"10.3390/toxins11100607","title":"Contribution and Interaction of Shiga Toxin Genes to Escherichia coli O157:H7 Virulence","year":2019,"lang":"en","type":"article","venue":"Toxins","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Children's Hospital Research Institute; Washington State University; Alberta Children's Hospital Foundation; National Institutes of Health; Children's Hospital Foundation; Cumming School of Medicine, University of Calgary; Alberta Innovates; University of Calgary; Alberta Health Services","keywords":"Shiga toxin; Biology; Escherichia coli; Genotype; Virulence; Microbiology; Population; Polymerase chain reaction; Typing; Diarrhea; Gene; Toxin; Virology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001664822,0.0001027992,0.0001467971,0.00003320127,0.00004114443,0.00001869557,0.0001085959,0.00007460322,0.00003286035],"category_scores_gemma":[0.0001943483,0.00009759419,0.00003627793,0.0001052158,0.00005181896,0.000008963864,0.0002034416,0.00007112508,0.00002994905],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001935916,"about_ca_system_score_gemma":0.00003975179,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004793769,"about_ca_topic_score_gemma":0.00009120072,"domain_scores_codex":[0.9992422,0.00005265391,0.000144789,0.0002451154,0.0001230657,0.0001921307],"domain_scores_gemma":[0.9994929,0.00002267312,0.00005578468,0.0002105214,0.000143105,0.00007504382],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001460096,0.00004907968,0.007805387,0.00002494202,0.00003710156,4.805565e-7,0.00005811659,0.00002384074,0.9900193,0.0001536262,0.0003589827,0.001323119],"study_design_scores_gemma":[0.0004444288,0.0007784148,0.04163295,0.00002773344,0.000009573375,0.000001977299,0.0001884119,0.0001731848,0.9131315,0.00002410288,0.04343776,0.0001499086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971763,0.0006521136,0.0004228864,0.0002611346,0.0001168836,0.000314686,0.00001737012,0.000008508228,0.00103008],"genre_scores_gemma":[0.998071,0.0004226834,0.0005458761,0.0002099712,0.00007344541,0.0000291904,0.00001552678,0.000009996666,0.0006223844],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07688777,"threshold_uncertainty_score":0.3979775,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01078978979158496,"score_gpt":0.2850655535659395,"score_spread":0.2742757637743546,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}