{"id":"W2981101604","doi":"10.1186/s12864-019-6146-7","title":"DNA methylomes and transcriptomes analysis reveal implication of host DNA methylation machinery in BmNPV proliferation in Bombyx mori","year":2019,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"Government of Jiangsu Province; Jiangsu University; Six Talent Peaks Project in Jiangsu Province; National Natural Science Foundation of China","keywords":"Biology; DNA methylation; Differentially methylated regions; Methylated DNA immunoprecipitation; Transcriptome; Methylation; Epigenetics; Molecular biology; DNA methyltransferase; Gene; Epigenomics; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007505443,0.0002393471,0.0002129223,0.0004535198,0.0002496609,0.0002148734,0.0001026484,0.0002257123,0.001056185],"category_scores_gemma":[0.0001007726,0.0001449577,0.0003159471,0.0002734113,0.0001045438,0.0001917786,0.0002303448,0.0003206072,0.0002037865],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002545393,"about_ca_system_score_gemma":0.0001274421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002182961,"about_ca_topic_score_gemma":0.003245345,"domain_scores_codex":[0.9999009,0.000005984472,0.000004635764,0.00003989544,0.00002562426,0.00002289475],"domain_scores_gemma":[0.9999315,0.000007811583,0.00002710357,0.000004990962,0.00001442246,0.00001421343],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001015738,0.000005810955,0.003465401,0.00004768467,0.0000145221,0.00002130429,0.00004416209,0.00003864359,0.9939449,0.00002718761,0.00004478752,0.002243886],"study_design_scores_gemma":[0.00001605793,0.0003616079,0.6330148,0.00002916243,0.0001688469,0.0004186975,0.0002604606,0.002892867,0.3562159,0.0002021388,0.006394853,0.0000244884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9900003,0.003151206,0.002732366,0.00006034299,0.00001419966,0.00002449464,0.002932298,0.00007186973,0.001012888],"genre_scores_gemma":[0.9854056,0.001431899,0.003816634,0.00007909833,0.00001118211,0.0000653289,0.006118662,0.00002999484,0.003041647],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002182961,"threshold_uncertainty_score":0.004340529,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01615555868218676,"score_gpt":0.2334721147206879,"score_spread":0.2173165560385011,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}