{"id":"W2981360778","doi":"10.3390/plants8110438","title":"Developing Chloroplast Genomic Resources from 25 Avena Species for the Characterization of Oat Wild Relative Germplasm","year":2019,"lang":"en","type":"article","venue":"Plants","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Genome; Biology; Germplasm; Pseudogene; Genetics; Gene; Genomics; Shotgun sequencing; Sequence assembly; Reference genome; Comparative genomics; Genome size; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006273423,0.0004274525,0.0005838055,0.002390578,0.0006721769,0.0006825081,0.0006998525,0.0004041182,0.002156209],"category_scores_gemma":[0.0007869067,0.0002917381,0.0008224056,0.002324796,0.0002473147,0.0005789271,0.0007116218,0.0005746312,0.0007799884],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005993705,"about_ca_system_score_gemma":0.0008163494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002415968,"about_ca_topic_score_gemma":0.007485316,"domain_scores_codex":[0.999651,0.00003818509,0.00005309976,0.0001414784,0.00006906677,0.00004705558],"domain_scores_gemma":[0.9994863,0.00009981944,0.0001087107,0.00009009184,0.000112234,0.0001028194],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00026261,0.00007058446,0.0140137,0.0002568133,0.00007612012,0.0002790329,0.0003254732,0.0004572567,0.9561545,0.0003903889,0.0002587592,0.02745477],"study_design_scores_gemma":[0.0002353533,0.001255363,0.7169368,0.000221269,0.0006980654,0.00329409,0.001121575,0.005583674,0.1855341,0.001579364,0.08342051,0.0001197952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9478543,0.001414228,0.02336162,0.0001083153,0.00004129022,0.0002892691,0.02456439,0.0003299217,0.002036744],"genre_scores_gemma":[0.7290697,0.001361653,0.09854803,0.0001632438,0.000051847,0.0005391319,0.1677395,0.0002371584,0.002289665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002415968,"threshold_uncertainty_score":0.007213175,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01702357116961986,"score_gpt":0.2093587686133405,"score_spread":0.1923351974437207,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}