{"id":"W2981472574","doi":"10.1016/s1473-3099(19)30538-9","title":"Escherichia coli causing bloodstream and other extraintestinal infections: tracking the next pandemic","year":2019,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"","keywords":"Escherichia coli; Multilocus sequence typing; Biology; Genotyping; Typing; Microbiology; Virology; Genetics; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002092065,0.0004077166,0.000394908,0.00003612303,0.0003583308,0.000314315,0.000310236,0.0003867658,0.00006786274],"category_scores_gemma":[0.0003446714,0.0002559706,0.0001685761,0.0001024632,0.0004788901,0.00001062281,0.0001598958,0.0008050621,0.00002389777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003870398,"about_ca_system_score_gemma":0.0001546269,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001300919,"about_ca_topic_score_gemma":0.00009412657,"domain_scores_codex":[0.9982466,0.0003113833,0.0002690713,0.0005016748,0.0001794638,0.0004918355],"domain_scores_gemma":[0.9984406,0.0002738858,0.0002941934,0.0008702386,0.00008043824,0.00004060871],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007691174,0.00009513277,0.5532597,0.0003185052,0.0005077216,0.00003274145,0.00008157043,0.00004879224,0.0134184,0.00003424448,0.4310128,0.00111352],"study_design_scores_gemma":[0.0009566846,0.0002715955,0.06183068,0.0003758097,0.0006766862,0.0005156134,0.00008713192,0.00003916277,0.0002931743,0.000419456,0.933739,0.0007949772],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9731457,0.004074926,0.0002284824,0.01860965,0.0007659756,0.0008068543,0.0002387875,0.0001541756,0.001975491],"genre_scores_gemma":[0.7529767,0.001073141,0.00002837456,0.233978,0.01056775,0.00006172756,0.0001919253,0.0001311176,0.0009913229],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5027262,"threshold_uncertainty_score":0.9999893,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03261509254975407,"score_gpt":0.277773136717553,"score_spread":0.2451580441677989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}