{"id":"W2981657561","doi":"10.1093/nar/gkz920","title":"WormBase: a modern Model Organism Information Resource","year":2019,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":368,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Medical Research Council; National Human Genome Research Institute; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences","keywords":"Biology; Organism; Model organism; Computational biology; Resource (disambiguation); Evolutionary biology; Genetics; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008403037,0.0001304758,0.000122538,0.0001142358,0.0001492499,0.000110222,0.0004204991,0.0002582299,0.0001095443],"category_scores_gemma":[0.00005057734,0.0001214713,0.00006228596,0.0001878636,0.00008757324,0.00002484626,0.0004132266,0.0003718014,0.0007870874],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004089345,"about_ca_system_score_gemma":0.000157108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007210826,"about_ca_topic_score_gemma":0.00000366779,"domain_scores_codex":[0.9985437,0.00005464598,0.0002598217,0.0002043757,0.0004411868,0.0004962339],"domain_scores_gemma":[0.9989632,0.00001458515,0.00005372963,0.0006404939,0.000193572,0.000134417],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001020401,0.0002236852,0.002830525,0.0003658098,0.0002239399,0.00000458917,0.004820613,0.03601224,0.5003772,0.01133384,0.2590322,0.1837549],"study_design_scores_gemma":[0.001494474,0.000462557,0.0003389191,0.00003762717,0.000007495004,0.00002042498,0.0009136371,0.6582175,0.01154548,0.005186507,0.3213016,0.0004737838],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8888642,0.0002139474,0.02242223,0.0004564179,0.00008347468,0.0005823395,0.00003012815,0.00003427973,0.08731305],"genre_scores_gemma":[0.9926919,0.00006484663,0.002093777,0.0005676424,0.0001225103,0.00001702677,0.0001929233,0.00002563715,0.004223775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6222053,"threshold_uncertainty_score":0.9999909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01771956950396213,"score_gpt":0.2793823306543035,"score_spread":0.2616627611503413,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}