{"id":"W2982290461","doi":"10.1128/aem.01903-19","title":"Horizontal Gene Transfer and Acquired Antibiotic Resistance in Salmonella enterica Serovar Heidelberg following<i>In Vitro</i>Incubation in Broiler Ceca","year":2019,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agricultural Research Service; National Science Foundation","keywords":"Salmonella enterica; Broiler; Serotype; Microbiology; Salmonella; Incubation; Biology; Gene transfer; Antibiotics; Antibiotic resistance; In vitro; Horizontal gene transfer; Enterobacteriaceae; Gene; Bacteria; Escherichia coli; Food science; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002913045,0.0002526758,0.0002099702,0.0001760686,0.0002195679,0.0004498756,0.0002237948,0.0003611637,0.0008257342],"category_scores_gemma":[0.0002689232,0.0001762003,0.0003591556,0.00009525664,0.0002646458,0.0002126403,0.0004101852,0.0004715918,0.0002357522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002584683,"about_ca_system_score_gemma":0.00022131,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002862293,"about_ca_topic_score_gemma":0.00265808,"domain_scores_codex":[0.9996475,0.00008587406,0.00002920331,0.00006723678,0.00006292394,0.0001072788],"domain_scores_gemma":[0.9997525,0.0000917854,0.00005044994,0.00003648997,0.00003403141,0.00003471357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001484142,0.00006490461,0.001846774,0.00002216831,0.00000925461,0.0000977744,0.00009300188,0.0000327428,0.9967946,0.000044734,0.00001782286,0.0008277567],"study_design_scores_gemma":[0.00001929713,0.003121237,0.05896156,0.00002154449,0.00006106305,0.0006037361,0.0004563075,0.0009357128,0.9350088,0.00005748907,0.0007380715,0.00001526391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989084,0.0001090746,0.0004498816,0.00002198114,0.0000104218,0.00001343276,0.00005221229,0.000007128109,0.000427468],"genre_scores_gemma":[0.9975178,0.0001433757,0.0008950422,0.00002659001,0.000008567473,0.00001550915,0.000230812,0.000007044393,0.001155216],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002862293,"threshold_uncertainty_score":0.00569123,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004401522752022178,"score_gpt":0.1619892149248081,"score_spread":0.1575876921727859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}