{"id":"W2983304941","doi":"10.1186/s12887-019-1820-0","title":"The prevalence and clinical characteristics of pertussis-associated pneumonia among infants in Botswana","year":2019,"lang":"en","type":"article","venue":"BMC Pediatrics","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; BC Children's Hospital; University of British Columbia; University of British Columbia Hospital","funders":"National Institute of Allergy and Infectious Diseases; Canadian Child Health Clinician Scientist Program; University of Pennsylvania; European Society for Paediatric Infectious Diseases; Center for AIDS Research, University of Washington; BC Children's Hospital; Michael Smith Health Research BC; ViiV Healthcare; National Institutes of Health; International AIDS Society; Children's Hospital Foundation; Thrasher Research Fund","keywords":"Medicine; Pneumonia; Bordetella pertussis; Pediatrics; Vaccination; Immunology; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004781919,0.0002996429,0.0001969286,0.001066055,0.0005293203,0.0005091703,0.0003999389,0.0004252728,0.0008221579],"category_scores_gemma":[0.001288875,0.0003554844,0.0002047075,0.0009327262,0.0003884946,0.0002577296,0.0004883752,0.0003838353,0.0001464307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001234748,"about_ca_system_score_gemma":0.0007968009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03211427,"about_ca_topic_score_gemma":0.04282709,"domain_scores_codex":[0.9996732,0.00005471699,0.0000408862,0.00006172136,0.00005933722,0.0001101054],"domain_scores_gemma":[0.9995161,0.00006975883,0.0002182871,0.00001532758,0.00007616,0.0001043392],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000317638,0.00001360861,0.9974173,0.00001164497,0.000007690859,0.0003674542,0.0003572098,0.00001225322,0.0007292658,0.000009581018,0.00004890065,0.0009933822],"study_design_scores_gemma":[0.000002282091,0.00005679912,0.9985296,0.00001699614,0.000004862414,0.0005647974,0.0006005426,0.00003445991,0.00005707654,0.000006269036,0.0001244951,0.000001786861],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995135,0.0001109025,0.00001543843,0.00003007541,0.000001951069,0.00000818041,0.000130773,0.000001587618,0.0001876054],"genre_scores_gemma":[0.999553,0.0001390094,0.00005724817,0.00003228401,0.000001732333,0.00001342487,0.0001321775,0.0000010659,0.00006993313],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03211427,"threshold_uncertainty_score":0.06385469,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0126369749271658,"score_gpt":0.2633764395436075,"score_spread":0.2507394646164416,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}