{"id":"W2983794036","doi":"10.1038/s41385-019-0221-x","title":"Despite early antiretroviral therapy effector memory and follicular helper CD4 T cells are major reservoirs in visceral lymphoid tissues of SIV-infected macaques","year":2019,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Université Laval","funders":"National Institute of Allergy and Infectious Diseases; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Yerkes National Primate Research Center, Emory University; National Institutes of Health; Canadian Foundation for AIDS Research; Université Laval; Gilead Sciences; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Mesenteric lymph nodes; Spleen; Lymphatic system; Biology; Lymph; Viral load; Immunology; Effector; Viral replication; Virology; Virus; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000955309,0.0001956435,0.0002781983,0.0001589824,0.0002621591,0.0003492344,0.0001269843,0.0001943391,0.002368792],"category_scores_gemma":[0.0001524636,0.00008996637,0.0001007028,0.00007202086,0.0002433403,0.0001188495,0.0001860547,0.0004231088,0.0002819109],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001468629,"about_ca_system_score_gemma":0.0001793656,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007866822,"about_ca_topic_score_gemma":0.001520892,"domain_scores_codex":[0.9998825,0.0000207546,0.000008290859,0.00003105788,0.00002308607,0.00003424799],"domain_scores_gemma":[0.9999485,0.000009729741,0.00001234759,0.000007969375,0.000007576734,0.00001372027],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002378082,0.00004005449,0.002650285,0.00008521002,0.000008798503,0.0001018501,0.0000782745,0.00003739116,0.9856843,0.00008305137,0.00008030202,0.01091257],"study_design_scores_gemma":[0.00008507518,0.00318536,0.1866357,0.0001207972,0.0001309851,0.003403571,0.0008086262,0.001441587,0.7864621,0.0005516646,0.0171521,0.00002246595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941756,0.002784503,0.000882872,0.00008364908,0.00001495147,0.00002161428,0.0001889869,0.00004807004,0.001799749],"genre_scores_gemma":[0.9960122,0.0006132373,0.001102815,0.00007078818,0.00001800107,0.00003474768,0.0002143015,0.000008446915,0.001925427],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002368792,"threshold_uncertainty_score":0.007924378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007485808316573544,"score_gpt":0.2390133272299252,"score_spread":0.2315275189133517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}