{"id":"W2983947643","doi":"10.1016/j.cell.2019.10.014","title":"Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome","year":2019,"lang":"en","type":"article","venue":"Cell","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":508,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"Région Bretagne; Prince Albert II of Monaco Foundation; National Aeronautics and Space Administration; Fondation Veolia Environnement; King Abdullah University of Science and Technology; Eidgenössische Technische Hochschule Zürich; European Commission; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; European Research Council; Gordon and Betty Moore Foundation; Agence Nationale de la Recherche; Helmut Horten Stiftung; Ministerio de Economía y Competitividad; National Science Foundation","keywords":"Biology; Transcriptome; Biogeochemistry; Gene; Microbial population biology; Ecology; Evolutionary biology; Gene expression; Computational biology; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001754522,0.0001925214,0.0002885811,0.0004552361,0.0001863332,0.0007911032,0.000161988,0.0004130237,0.001397506],"category_scores_gemma":[0.0005103002,0.0002283721,0.0002450527,0.0005030059,0.0003067515,0.0005987161,0.0005035438,0.0004428329,0.0004044709],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003361423,"about_ca_system_score_gemma":0.0001830417,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001117829,"about_ca_topic_score_gemma":0.002624746,"domain_scores_codex":[0.9998295,0.00001634488,0.000006373726,0.0000696474,0.00003528391,0.00004286185],"domain_scores_gemma":[0.9997656,0.00005675609,0.00006040876,0.00002219942,0.00005255517,0.00004243443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002199484,0.0000161488,0.02556697,0.00003352241,0.0000220719,0.00002799153,0.00009165404,0.0001658052,0.9688762,0.0001871139,0.00007707364,0.004715461],"study_design_scores_gemma":[0.00001745765,0.0001341207,0.9038742,0.00001333512,0.00004126894,0.0001025996,0.0005089451,0.00521328,0.08793108,0.0007061223,0.00143289,0.00002481677],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973224,0.0003360672,0.0009242641,0.00007781114,0.00001237662,0.000004328403,0.000606216,0.0000230106,0.000693655],"genre_scores_gemma":[0.9974941,0.0002056996,0.0005812842,0.00006929691,0.00001271232,0.00001152454,0.0006621337,0.00002015426,0.0009430335],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001397506,"threshold_uncertainty_score":0.00467515,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01298878314535743,"score_gpt":0.2123614621024636,"score_spread":0.1993726789571062,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}