{"id":"W2984849752","doi":"10.1016/j.coisb.2019.10.008","title":"Modeling cell–cell communication for immune systems across space and time","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Systems Biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"H2020 European Research Council; European Research Council; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Canadian Institute for Advanced Research; European Molecular Biology Organization","keywords":"Juxtacrine signalling; Paracrine signalling; Computer science; Population; Autocrine signalling; Biology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001092739,0.0005879818,0.002224372,0.0003230639,0.0002169677,0.00007750462,0.0004799573,0.001298057,0.00003054316],"category_scores_gemma":[0.00005550656,0.0005038192,0.0003565788,0.0001777913,0.0001221018,0.0001230838,0.0002668572,0.0009471691,0.001352334],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002369575,"about_ca_system_score_gemma":0.0001304489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000291325,"about_ca_topic_score_gemma":9.73008e-7,"domain_scores_codex":[0.995589,0.00144315,0.001603205,0.0007376657,0.000033597,0.0005934519],"domain_scores_gemma":[0.997511,0.0005099601,0.0009402163,0.0008422933,0.0001680236,0.00002846496],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008165519,0.00181991,0.0001502323,0.490457,0.001453285,5.220196e-7,0.002949657,0.001599152,0.004080339,0.01725455,0.05863097,0.4207878],"study_design_scores_gemma":[0.00112311,0.0001653917,4.590342e-7,0.01216094,0.00009807583,0.00006041045,0.0003372043,0.002024572,0.000005106712,0.000004568859,0.9835476,0.0004725924],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000040519,0.9430037,0.001182199,0.00000849328,0.05222367,0.002993471,0.0001660655,0.00007228454,0.0003096502],"genre_scores_gemma":[0.001714064,0.9848674,0.000006806345,0.000001984776,0.0002142177,0.0006913332,0.006719884,0.0000689956,0.00571531],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9249166,"threshold_uncertainty_score":0.9999985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1061220367618402,"score_gpt":0.3816844789256976,"score_spread":0.2755624421638574,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}