{"id":"W2984964263","doi":"10.1136/thoraxjnl-2019-214098","title":"<i>Burkholderia cenocepacia</i>ET12 transmission in adults with cystic fibrosis","year":2019,"lang":"en","type":"article","venue":"Thorax","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Michael's Hospital; SickKids Foundation; Hospital for Sick Children","funders":"Cystic Fibrosis Foundation","keywords":"Burkholderia cenocepacia; Burkholderia cepacia complex; Medicine; Cystic fibrosis; Epidemiology; Transmission (telecommunications); Whole genome sequencing; Burkholderia; Microbiology; Internal medicine; Genome; Genetics; Biology; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002343321,0.0001635271,0.000130664,0.0003755736,0.000414533,0.0005605363,0.0001283165,0.000255791,0.001010791],"category_scores_gemma":[0.0007898242,0.0001154849,0.00009740533,0.0005606399,0.000360018,0.0002017873,0.0003761983,0.0002621496,0.0001093859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007473881,"about_ca_system_score_gemma":0.0005446764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.09290432,"about_ca_topic_score_gemma":0.1079888,"domain_scores_codex":[0.9996656,0.00004748068,0.00004414507,0.00008447002,0.00005620346,0.0001021205],"domain_scores_gemma":[0.9994321,0.00006436309,0.0002728604,0.00002403908,0.00009644737,0.0001100395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008922569,0.00001069149,0.9943202,0.00002456919,0.000009605572,0.0007822305,0.0006184764,0.00004174838,0.001395566,0.00002482694,0.0002956027,0.002387209],"study_design_scores_gemma":[0.000003586308,0.000097518,0.9965043,0.00003138416,0.00001598404,0.001570351,0.0009993825,0.00008473972,0.0003273452,0.00001208444,0.0003496259,0.00000372276],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990538,0.0001920745,0.00002777281,0.00005021967,0.0000017665,0.000006095301,0.0003965645,0.000002124301,0.0002695958],"genre_scores_gemma":[0.9994681,0.0001202387,0.00004331687,0.00002941972,0.000003924608,0.000001991913,0.0002481521,8.261144e-7,0.00008404862],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09290432,"threshold_uncertainty_score":0.1847271,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00806034663565508,"score_gpt":0.2743239786519059,"score_spread":0.2662636320162508,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}