{"id":"W2985535748","doi":"10.1016/j.cmi.2019.10.033","title":"Bacillus Calmette–Guérin strains with defined resistance mutations: a new tool for tuberculosis laboratory quality control","year":2019,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"rpoB; Isoniazid; Microbiology; Biology; Mycobacterium tuberculosis; Rifampicin; Genotype; Tuberculosis; Drug resistance; Virology; Streptomycin; Antibacterial agent; Antibiotics; Genetics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006141645,0.0008637333,0.0009884579,0.002637287,0.0003280781,0.001704729,0.001151101,0.001620169,0.001179463],"category_scores_gemma":[0.007524912,0.0006771549,0.0006378107,0.0009448112,0.001474022,0.001265159,0.001783139,0.001720383,0.0008828957],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005567576,"about_ca_system_score_gemma":0.0006518957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003327993,"about_ca_topic_score_gemma":0.0003080478,"domain_scores_codex":[0.9884227,0.003007561,0.000729222,0.00147066,0.006083406,0.0002864362],"domain_scores_gemma":[0.992057,0.002183816,0.002261132,0.001584647,0.001420142,0.0004932902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004411931,0.0003133399,0.006082397,0.0003187866,0.0000757571,0.0002784787,0.0001419249,0.0007722782,0.8839673,0.00132448,0.001164084,0.1051199],"study_design_scores_gemma":[0.0002062205,0.002009602,0.01577173,0.0003399022,0.0002491963,0.004611725,0.0000873924,0.02294677,0.9144002,0.001771725,0.03746597,0.0001394642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.1864435,0.01416872,0.7827349,0.002412966,0.0008252758,0.0005359052,0.001129908,0.007029121,0.004719642],"genre_scores_gemma":[0.3441201,0.004436452,0.6438487,0.0008729699,0.0004300865,0.000625407,0.001711988,0.0004688113,0.003485607],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.006141645,"threshold_uncertainty_score":0.03248054,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03908495084171305,"score_gpt":0.376728750958682,"score_spread":0.337643800116969,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}