{"id":"W2986438586","doi":"10.3390/ani9110997","title":"Genome-Wide Association Study for Milk Fatty Acids in Holstein Cattle Accounting for the DGAT1 Gene Effect","year":2019,"lang":"en","type":"article","venue":"Animals","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Genomics; University of Guelph","funders":"Agriculture and Agri-Food Canada; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Canadian Dairy Commission; Dairy Farmers of Canada","keywords":"Candidate gene; Genome-wide association study; Gene; Biology; Genetics; Single-nucleotide polymorphism; Genetic association; Covariate; Dairy cattle; Fatty acid; Bovine milk; Food science; Genotype; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007569116,0.0001414887,0.0001802264,0.00002198653,0.00008898251,0.00003282472,0.0002279152,0.0001290753,0.00001123185],"category_scores_gemma":[0.0003478008,0.0001106496,0.00009831652,0.00005907669,0.00001335962,0.000003425171,0.00006432475,0.00006508188,0.0000143483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003025118,"about_ca_system_score_gemma":0.00003803984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001842824,"about_ca_topic_score_gemma":0.00005462827,"domain_scores_codex":[0.9990165,0.00006515404,0.0002076945,0.0003166085,0.0001068756,0.000287171],"domain_scores_gemma":[0.9991276,0.0003917797,0.0001156947,0.0002657958,0.0000739985,0.00002515931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001834378,0.00006918455,0.851951,0.00003227132,0.0001047842,5.766089e-8,0.0002043134,0.0003586496,0.1461602,0.0000371055,0.0002967475,0.0006022895],"study_design_scores_gemma":[0.001287033,0.001477085,0.9411134,0.000004955853,0.00005036121,3.210703e-7,0.0001846634,0.0000190748,0.05038246,0.0001609767,0.005168741,0.0001509725],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939297,0.0006691635,0.002642448,0.0001410714,0.0002073833,0.002214089,0.000038542,0.000007630061,0.0001499187],"genre_scores_gemma":[0.9958518,0.00000880255,0.002497569,0.0002036327,0.0002767346,0.0003635939,0.00004966727,0.00002618932,0.0007220357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09577771,"threshold_uncertainty_score":0.4512161,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01000334271446211,"score_gpt":0.2554422218839561,"score_spread":0.245438879169494,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}