{"id":"W2986470799","doi":"10.1016/j.meegid.2019.104060","title":"Diversity of Babesia spp. in cervid ungulates based on the 18S rDNA and cytochrome c oxidase subunit I phylogenies","year":2019,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"Agentura Pro Zdravotnický Výzkum České Republiky; Ministerstvo Školství, Mládeže a Tělovýchovy; European Cooperation in Science and Technology","keywords":"Biology; Babesia; 18S ribosomal RNA; Babesiosis; Zoology; Cytochrome b; Cytochrome c oxidase subunit I; Tick; Ribosomal RNA; Genetic variation; Phylogenetics; Ecology; Mitochondrial DNA; Gene; Genetics; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001574825,0.0001175379,0.0001445724,0.000152193,0.0002534839,0.000008939674,0.0000467929,0.0001331179,0.0001882899],"category_scores_gemma":[0.00003985721,0.00009737129,0.00004209256,0.0001544089,0.0001647052,0.00004024679,0.000119367,0.0001198431,0.00003983155],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005543094,"about_ca_system_score_gemma":0.00002700194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009379413,"about_ca_topic_score_gemma":0.0003166541,"domain_scores_codex":[0.9993202,0.0001547858,0.0001468821,0.0001911965,0.00003722259,0.0001497195],"domain_scores_gemma":[0.9995401,0.0001310362,0.00008312902,0.0001662428,0.00006239247,0.00001711841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007805965,0.0001126512,0.8835803,0.00003187908,0.00003888843,3.893127e-7,0.0001070538,0.0008490637,0.11448,0.0004144754,0.00005363542,0.0002535005],"study_design_scores_gemma":[0.0007613004,0.0003771523,0.9866349,0.00002822855,0.00003961075,0.000008470237,0.00003469004,0.0007034392,0.01059545,0.0004555882,0.0002540531,0.0001070791],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997928,0.001225916,0.00007687188,0.00006439118,0.0001857291,0.0002677938,0.00001890519,0.00002479213,0.0002075718],"genre_scores_gemma":[0.9996836,0.0001733699,0.000004360155,0.00005421215,0.00001250909,0.000007096857,0.00001446619,0.000007035118,0.00004334476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1038846,"threshold_uncertainty_score":0.3970686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00822906933234908,"score_gpt":0.1991519011807097,"score_spread":0.1909228318483606,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}