{"id":"W2986908694","doi":"","title":"Biofilm formation in Escherichia coli and regulatory gene expression via quorum sensing systems","year":2011,"lang":"en","type":"dissertation","venue":"Mspace (University of Manitoba)","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Quorum sensing; Biofilm; Escherichia coli; Microbiology; Chemistry; Gene expression; Gene; Biology; Computational biology; Bacteria; Genetics; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001186915,0.0002020309,0.0002738581,0.0001353413,0.0001272683,0.00001887093,0.0001037401,0.0005125137,0.000001384681],"category_scores_gemma":[0.000007739911,0.0002553317,0.00006680141,0.00007946389,0.00005502015,0.00002086374,0.00007689506,0.0001306086,0.000003352685],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003294654,"about_ca_system_score_gemma":0.000038882,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001669172,"about_ca_topic_score_gemma":0.04933395,"domain_scores_codex":[0.9991344,0.00008403134,0.0001455942,0.0003190207,0.0001152061,0.0002018138],"domain_scores_gemma":[0.9992713,0.000004915533,0.0003152374,0.0002494298,0.00009584846,0.00006332184],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002834928,0.00001899853,0.0006137352,0.0001919198,0.00002233804,0.00001202769,0.0001772101,0.000005044099,0.9976874,0.000009969121,0.0003260255,0.0006518579],"study_design_scores_gemma":[0.0007558015,0.0001532382,0.05431927,0.000444583,0.00007016135,0.000019553,0.009934576,0.0003543908,0.9309441,0.000006545679,0.002532188,0.0004656152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978972,0.0005764122,0.0001947401,0.00001973802,0.00042356,0.0002421945,0.00001685507,0.00001283257,0.0006164836],"genre_scores_gemma":[0.9964221,0.0003643177,0.001817221,0.000009337772,0.00008570757,1.59664e-7,0.0007376045,0.00002607239,0.0005375325],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06674331,"threshold_uncertainty_score":0.9999899,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009476036258465902,"score_gpt":0.1855817481783706,"score_spread":0.1761057119199047,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}