{"id":"W2989788978","doi":"10.1530/rep-19-0293","title":"Blastocyst transfer in mice alters the placental transcriptome and growth","year":2019,"lang":"en","type":"article","venue":"Reproduction","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Christie (Canada); Calgary Laboratory Services; University of Calgary","funders":"Division of Materials Research; Newnham College, University of Cambridge; Lister Institute of Preventive Medicine; Wellcome Trust","keywords":"Blastocyst; Biology; DNA methylation; Transcriptome; Epigenetics; Placenta; CpG site; Andrology; Gene; Embryo; Methylation; Bisulfite sequencing; Regulation of gene expression; Genetics; Gene expression; Embryogenesis; Fetus; Pregnancy; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002323519,0.00006515827,0.00005529939,0.0000253807,0.00002762694,0.00001106225,0.00004152323,0.00005237312,0.000006548827],"category_scores_gemma":[0.00001538361,0.00005217527,0.00002506114,0.00006133419,0.000029791,0.000004268498,0.000008476967,0.00005678958,0.000005145047],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008501347,"about_ca_system_score_gemma":0.00001004982,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004004989,"about_ca_topic_score_gemma":0.0000264492,"domain_scores_codex":[0.9993934,0.00004355509,0.0001011462,0.0003057117,0.00006268075,0.00009348067],"domain_scores_gemma":[0.9997792,0.000003909573,0.00001288721,0.0001656257,0.00002090222,0.00001753348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006107911,0.00001748099,0.015222,0.00001298965,0.000006764606,1.476103e-7,0.000143749,0.00009111028,0.9828911,0.00004592846,0.00001521571,0.001492405],"study_design_scores_gemma":[0.0005265034,0.0001686974,0.06377638,0.000007602039,0.00000858101,0.000009395428,0.00013916,0.0000688253,0.9297096,0.00009567574,0.00537911,0.000110528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969044,0.001391368,0.0003782544,0.0005250367,0.0002475428,0.0002291447,0.000002144389,0.000004622952,0.0003174637],"genre_scores_gemma":[0.9989359,0.0004994594,0.00004095165,0.00002891139,0.0001448317,0.000007967596,0.00002052126,0.000009087434,0.0003123048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05318159,"threshold_uncertainty_score":0.2127646,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006361828950052856,"score_gpt":0.2169805104214343,"score_spread":0.2106186814713814,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}