{"id":"W2989843386","doi":"","title":"HIV infection is associated with preservation of MAIT cells in the lungs but alteration of their phenotype and T cell receptor repertoire","year":2016,"lang":"en","type":"article","venue":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Phenotype; Medicine; Repertoire; Human immunodeficiency virus (HIV); Immunology; Receptor; Cell; Virology; Biology; Genetics; Gene; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005874765,0.0002282526,0.0005466783,0.0003072847,0.0001695083,0.000004971887,0.0004796438,0.0005911079,0.001326215],"category_scores_gemma":[0.0001412587,0.0001849051,0.0001974859,0.0005186666,0.0008846082,0.000469187,0.0002291167,0.0004400669,0.00003390172],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001900895,"about_ca_system_score_gemma":0.00009491114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007041276,"about_ca_topic_score_gemma":0.0003893668,"domain_scores_codex":[0.9983293,0.0004293878,0.0004197541,0.0004018151,0.0001722661,0.0002474147],"domain_scores_gemma":[0.9976959,0.000634782,0.0007431107,0.0004710558,0.0004199109,0.00003522889],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002482874,0.0006974781,0.00655019,0.00008094159,0.0001311597,0.000005108866,0.0004739061,0.000007764584,0.9788103,0.0004154372,0.009334592,0.001010259],"study_design_scores_gemma":[0.01233854,0.004003095,0.1741015,0.001628495,0.0006765092,0.00005885585,0.004020648,0.0001362275,0.7622516,0.0003307263,0.03949597,0.000957806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890293,0.0001376586,0.004915924,0.0007600792,0.0001307072,0.0005522866,0.0000877389,0.00005023011,0.004336007],"genre_scores_gemma":[0.9930583,0.0006017738,0.0003241708,0.00003541777,0.000005630617,3.153238e-7,0.00004894043,0.00001220929,0.005913292],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2165587,"threshold_uncertainty_score":0.9995867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00886122908743281,"score_gpt":0.1758556372894957,"score_spread":0.1669944082020629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}