{"id":"W2990213505","doi":"10.1038/s41598-019-53569-5","title":"Qualitative microbiome profiling along a wastewater system in Kampala, Uganda","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Schlumberger (Canada); University Health Network","funders":"FP7 International Cooperation; Zürcher Hochschule für Angewandte Wissenschaften; Deutsche Gesellschaft für Internationale Zusammenarbeit; Universität Basel; Direktion für Entwicklung und Zusammenarbeit; Ministry of Health, Uganda; Eidgenössische Technische Hochschule Zürich","keywords":"Wastewater; Wetland; Metagenomics; Environmental science; Sewage treatment; Population; Ecology; Environmental engineering; Biology; Environmental health; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001627979,0.0002602219,0.0003456235,0.001154736,0.0009355373,0.0008625079,0.0001719156,0.0004355971,0.000402585],"category_scores_gemma":[0.0003619118,0.000225544,0.0002063318,0.001217662,0.0004400079,0.0003771952,0.000868674,0.0002385647,0.0001113843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001734684,"about_ca_system_score_gemma":0.0003682514,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001977792,"about_ca_topic_score_gemma":0.004005255,"domain_scores_codex":[0.9997857,0.00004824132,0.00001920802,0.00006105345,0.00004039579,0.00004535921],"domain_scores_gemma":[0.9998268,0.00003594446,0.00005381473,0.00000694039,0.00005238505,0.00002392183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000451519,0.0002120247,0.4075182,0.0005827895,0.0001219063,0.001993769,0.008175209,0.001055906,0.5529733,0.000202414,0.0001946032,0.02651827],"study_design_scores_gemma":[0.00001178708,0.0006112913,0.9568428,0.00007903342,0.00008278595,0.001303107,0.01457321,0.001214714,0.02280241,0.0002384782,0.00220305,0.00003734107],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993361,0.00008013915,0.0002476304,0.00001118072,0.000001272894,0.00001362775,0.0001463781,0.000002627421,0.0001610714],"genre_scores_gemma":[0.9979641,0.0001935495,0.001144101,0.00003541183,0.000001664761,0.00004960434,0.0002577815,0.00000296593,0.000350877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001977792,"threshold_uncertainty_score":0.003932595,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01631861795656093,"score_gpt":0.3087149138014374,"score_spread":0.2923962958448765,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}