{"id":"W2990213505","doi":"10.1038/s41598-019-53569-5","title":"Qualitative microbiome profiling along a wastewater system in Kampala, Uganda","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Schlumberger (Canada); University Health Network","funders":"FP7 International Cooperation; Zürcher Hochschule für Angewandte Wissenschaften; Deutsche Gesellschaft für Internationale Zusammenarbeit; Universität Basel; Direktion für Entwicklung und Zusammenarbeit; Ministry of Health, Uganda; Eidgenössische Technische Hochschule Zürich","keywords":"Wastewater; Wetland; Metagenomics; Environmental science; Sewage treatment; Population; Ecology; Environmental engineering; Biology; Environmental health; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001671024,0.0001431216,0.0002042684,0.0001447557,0.0001002033,0.0001423012,0.0001325486,0.00007947717,0.00002235113],"category_scores_gemma":[0.0001197701,0.0001188208,0.00007554373,0.0002497942,0.0001629111,0.00001324332,0.0002469639,0.0000781148,0.00006694591],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005911026,"about_ca_system_score_gemma":0.000146153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004252826,"about_ca_topic_score_gemma":0.0000564804,"domain_scores_codex":[0.9979855,0.0001351238,0.0004166927,0.0007910022,0.0002590432,0.0004126617],"domain_scores_gemma":[0.999061,0.00001207483,0.0001442898,0.0005596206,0.0001549203,0.00006806283],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002431873,0.00002326834,0.008925022,0.0001244644,0.00002700541,0.0000915697,0.001133003,0.000009157218,0.9885404,0.00001027659,0.001058527,0.00003298566],"study_design_scores_gemma":[0.0002819084,0.00006779285,0.001132467,0.0001005516,0.000004192418,0.0001176655,0.004250116,0.00002378698,0.9850527,0.0000668142,0.008703209,0.000198801],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964949,0.0002046932,0.00001601216,0.00003806255,0.00177927,0.0005314267,0.00000816698,0.00001642642,0.0009110509],"genre_scores_gemma":[0.9944963,0.000002377248,0.0004249786,0.000006523677,0.00005221722,0.00004362286,0.0001518324,0.00001632002,0.00480581],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007792555,"threshold_uncertainty_score":0.4845374,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01631861795656093,"score_gpt":0.3087149138014374,"score_spread":0.2923962958448765,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}