{"id":"W2990632541","doi":"10.2147/jir.s220960","title":"<p>PtpA and PknG Proteins Secreted by <em>Mycobacterium avium</em> subsp. <em>paratuberculosis</em> are Recognized by Sera from Patients with Rheumatoid Arthritis: A Case–Control Study</p>","year":2019,"lang":"en","type":"article","venue":"Journal of Inflammation Research","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Paratuberculosis; Immune system; Antibody; Virology; IRF5; Biology; Immunology; Microbiology; Mycobacterium; Medicine; Interferon regulatory factors; Bacteria; Genetics; Innate immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003263433,0.0005404946,0.0002927964,0.0008205437,0.0005889194,0.0003301685,0.0002829765,0.0004355212,0.001538529],"category_scores_gemma":[0.0007342978,0.000339594,0.0002051451,0.0004382665,0.000644234,0.0002639961,0.0002838025,0.0003219193,0.0002382855],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002373907,"about_ca_system_score_gemma":0.00012503,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001443992,"about_ca_topic_score_gemma":0.001286589,"domain_scores_codex":[0.9996469,0.00007008071,0.00003803687,0.000128681,0.000061153,0.00005523406],"domain_scores_gemma":[0.9995489,0.00009952473,0.000177317,0.00005284116,0.0000419192,0.00007945738],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006930932,0.000221654,0.9821299,0.00004213353,0.00006231791,0.003696728,0.0003150816,0.00002627707,0.01015385,0.00003629167,0.000139811,0.002482885],"study_design_scores_gemma":[0.00004250771,0.000801774,0.9801593,0.000007009676,0.00006533297,0.0165427,0.000259288,0.0001688597,0.001505531,0.00002292843,0.0004191209,0.000005647805],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996674,0.00007832706,0.00006393253,0.000006713692,0.000002178014,0.000006505513,0.00002259508,0.000001929185,0.0001504692],"genre_scores_gemma":[0.999705,0.00004124349,0.00005886789,0.00001047943,0.000008495894,0.000005639879,0.00005655555,9.083918e-7,0.0001127159],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001538529,"threshold_uncertainty_score":0.005146861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01321919338671914,"score_gpt":0.2659869958709334,"score_spread":0.2527678024842143,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}