{"id":"W2991184602","doi":"10.1089/mdr.2019.0333","title":"Co-Occurrence of Plasmid-Mediated Colistin Resistance ( <i>mcr-1</i> ) and Extended-Spectrum <i>β</i> -Lactamase Encoding Genes in <i>Escherichia coli</i> from Bovine Mastitic Milk in China","year":2019,"lang":"en","type":"article","venue":"Microbial Drug Resistance","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"MCR-1; Escherichia coli; Biology; Multilocus sequence typing; Colistin; Microbiology; Plasmid; Cephalosporin; Mastitis; Dairy cattle; Antibiotic resistance; Multiple drug resistance; Gene; Enterobacteriaceae; Antibiotics; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004201248,0.0004691279,0.0007062627,0.0001415899,0.00007280475,0.00005875972,0.0005227698,0.0002585873,0.00005764211],"category_scores_gemma":[0.000180403,0.000526275,0.00009594054,0.0004548995,0.0003906345,0.00003270162,0.0001345359,0.0003368427,0.00001585397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001067023,"about_ca_system_score_gemma":0.0002500261,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002467495,"about_ca_topic_score_gemma":0.01205376,"domain_scores_codex":[0.9968446,0.0002395921,0.0008999152,0.001067179,0.0002609373,0.0006877088],"domain_scores_gemma":[0.9985451,0.000146335,0.0004120091,0.0006938128,0.00006398782,0.0001387718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002143614,0.0001756467,0.06206014,0.0003250518,0.00002302922,0.00004238388,0.0001496454,0.00001965042,0.9307071,0.0001038619,0.004228939,0.00002091024],"study_design_scores_gemma":[0.004853533,0.0001244265,0.1712521,0.001384071,0.00003207531,0.000003980297,0.0002335396,0.00005009239,0.7810667,0.0001671306,0.03968131,0.00115104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914601,0.004022394,0.00008976381,0.0002789557,0.0002731657,0.0006431026,0.001708185,0.00002275733,0.001501572],"genre_scores_gemma":[0.9941943,0.001504683,0.001427007,0.0002458713,0.00008044462,0.00001770832,0.0006480353,0.00005093674,0.001831065],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1496404,"threshold_uncertainty_score":0.9997189,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00418653820758537,"score_gpt":0.2128388132170987,"score_spread":0.2086522750095133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}