{"id":"W2992628624","doi":"10.1038/s41396-019-0561-2","title":"Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing <i>Betaproteobacteria</i>","year":2019,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Office of Science; Genome Alberta; National Research Foundation; Genome British Columbia; Syncrude; U.S. Department of Energy; Government of Alberta; Genome Canada; Joint Genome Institute; Mitacs; National Research Foundation of Korea","keywords":"Biology; Betaproteobacteria; Methane monooxygenase; Gene; Monooxygenase; Ammonia monooxygenase; Bacteria; Methanotroph; Operon; Gene cluster; Anaerobic oxidation of methane; Alkane; Microbiology; Biochemistry; Genetics; Archaea; Escherichia coli; Enzyme; Cytochrome P450","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009156128,0.0004419817,0.0001517738,0.000267296,0.0001596064,0.0003355932,0.0001293291,0.0001752524,0.0003608353],"category_scores_gemma":[0.0001628087,0.0001460037,0.0002132634,0.000237421,0.0001360327,0.000206345,0.0003051443,0.0002304902,0.0001711799],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002145209,"about_ca_system_score_gemma":0.0001701991,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007824908,"about_ca_topic_score_gemma":0.0008137496,"domain_scores_codex":[0.9999236,0.000006862061,0.000004752535,0.00002416367,0.00001458245,0.00002612815],"domain_scores_gemma":[0.9998806,0.0000144573,0.00004312255,0.00001155532,0.00001785527,0.00003236399],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009295138,0.00001520202,0.006476063,0.00003387083,0.000005408943,0.00007761048,0.0000511383,0.00004356685,0.9898514,0.00005216393,0.00002456984,0.003275993],"study_design_scores_gemma":[0.00002697873,0.0005646622,0.2086226,0.00003234523,0.00007011137,0.001422287,0.0004315342,0.002526306,0.7810526,0.0003473025,0.004878493,0.00002474039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978405,0.0002221398,0.001252938,0.00002323235,0.0000039455,0.00001286517,0.0002600931,0.00003033207,0.0003538271],"genre_scores_gemma":[0.994289,0.0002205127,0.003523301,0.00003260255,0.000007237611,0.00001754052,0.001007659,0.000009271693,0.0008927166],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007824908,"threshold_uncertainty_score":0.001556456,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01048085703003755,"score_gpt":0.2070314086211625,"score_spread":0.1965505515911249,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}