{"id":"W2992696973","doi":"10.1128/jb.00625-19","title":"Analysis of the Topology and Active-Site Residues of WbbF, a Putative O-Polysaccharide Synthase from Salmonella enterica Serovar Borreze","year":2019,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Glycosyltransferase; Biology; Biochemistry; Periplasmic space; ATP synthase; Lipid A; Glycan; Biosynthesis; Bacterial outer membrane; Mutagenesis; Enzyme; Mutant; Bacteria; Gene; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009421693,0.0002740567,0.0002066129,0.0002152763,0.00007648064,0.0001989432,0.0001840064,0.0002315691,0.000573446],"category_scores_gemma":[0.00024119,0.00009933158,0.0002506779,0.0002483589,0.0001708081,0.0001960256,0.00009471526,0.0003047225,0.0003362507],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001708531,"about_ca_system_score_gemma":0.0001454072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008253397,"about_ca_topic_score_gemma":0.0005833087,"domain_scores_codex":[0.9999608,0.000007220233,0.000003349114,0.0000101712,0.00001025158,0.000008263771],"domain_scores_gemma":[0.9998054,0.00003530331,0.00006289069,0.00001194778,0.00002366773,0.00006072024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003730576,0.00004382522,0.002754515,0.00006423498,0.00001409979,0.0002005018,0.00004682126,0.0003134359,0.9940603,0.0001187924,0.00004804097,0.001962301],"study_design_scores_gemma":[0.00009408492,0.001634806,0.1894086,0.0000404525,0.0002145428,0.003345039,0.0004850202,0.01134012,0.7820168,0.0004007024,0.01096453,0.00005526691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974521,0.0003618479,0.001164378,0.00003647329,0.000009026274,0.000007870341,0.0005682695,0.00001225163,0.0003877752],"genre_scores_gemma":[0.9921039,0.0003941605,0.002751572,0.00002620693,0.00001062249,0.00000804108,0.004045928,0.00001487515,0.0006446824],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008253397,"threshold_uncertainty_score":0.001918375,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008741334210612111,"score_gpt":0.2336946890209772,"score_spread":0.2249533548103651,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}