{"id":"W2992996234","doi":"10.48550/arxiv.1912.02474","title":"Assembly ASM291031v2 (Genbank: GCA_002910315.2) identified as assembly of the Northern Dolly Varden (Salvelinus malma malma) genome, and not the Arctic char (S. alpinus) genome","year":2019,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Salvelinus; Arctic char; Biology; Zoology; Ecology; Fishery; Trout; Fish <Actinopterygii>","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007361686,0.0005133491,0.000471171,0.0001622692,0.0003666409,0.0001634905,0.001972021,0.0006104266,0.0001087285],"category_scores_gemma":[0.0001715511,0.0004364949,0.0005018695,0.000370451,0.0004290344,0.0000211073,0.001628562,0.0005912693,0.0002882398],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001023543,"about_ca_system_score_gemma":0.0004173713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002219483,"about_ca_topic_score_gemma":0.0002568527,"domain_scores_codex":[0.9968647,0.0004018487,0.0005950138,0.001414907,0.0002761832,0.000447293],"domain_scores_gemma":[0.9954892,0.00006867867,0.0009574426,0.002635892,0.0007019335,0.0001468419],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007473154,0.0005076692,0.02038628,0.001110832,0.002514032,0.00004638489,0.0009930843,0.03890322,0.9160333,0.01742937,0.001069017,0.0002594991],"study_design_scores_gemma":[0.005640694,0.0007030476,0.7048046,0.0005066881,0.003120771,0.000221418,0.00365882,0.009053498,0.2005443,0.002864453,0.06414104,0.004740629],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911984,0.0005312822,0.001976541,0.0004139685,0.0009494741,0.00114948,0.0001967698,0.00003663125,0.003547447],"genre_scores_gemma":[0.9716111,0.000843407,0.00003473218,0.0002721922,0.0002075943,0.000009995211,0.0002816532,0.00007404265,0.02666523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.715489,"threshold_uncertainty_score":0.9998087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04220850724195884,"score_gpt":0.2040715256984443,"score_spread":0.1618630184564854,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}