{"id":"W2993449075","doi":"10.1101/865345","title":"Surfactin production is not essential for pellicle and root-associated biofilm development of <i>Bacillus subtilis</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Danmarks Grundforskningsfond; National Research Foundation","keywords":"Surfactin; Biofilm; Bacillus subtilis; Lipopeptide; Microbiology; Bacteria; Chemistry; Biology; Microorganism; Bacillus (shape); Biological pest control; Strain (injury); Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015726,0.000270399,0.0002154579,0.0001737236,0.0001241408,0.0003273973,0.0001489586,0.000193864,0.001172529],"category_scores_gemma":[0.0002996909,0.0001251159,0.0001846192,0.0001191588,0.0001493382,0.0001354511,0.0002815405,0.000455143,0.0004374998],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002032393,"about_ca_system_score_gemma":0.0002012894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001776999,"about_ca_topic_score_gemma":0.001096429,"domain_scores_codex":[0.9997475,0.00005124972,0.00002780321,0.00004309934,0.0000860307,0.00004442528],"domain_scores_gemma":[0.999763,0.00007106526,0.0000601529,0.00002961884,0.00003156077,0.00004456605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004471981,0.00001197216,0.0002161029,0.00001186489,0.000001669992,0.00001998922,0.000007583507,0.00001499644,0.9993353,0.0000184283,0.00001745204,0.0002998787],"study_design_scores_gemma":[0.000009607846,0.0001540929,0.01177037,0.000006071474,0.000008270594,0.000283921,0.00004716293,0.0006746169,0.985564,0.00003270288,0.001444295,0.00000497059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966242,0.0003988023,0.001116577,0.00006667881,0.00001397281,0.00001073111,0.0004971501,0.00004878042,0.001223031],"genre_scores_gemma":[0.9944535,0.0001443502,0.00140769,0.00002513811,0.000005210965,0.00001678108,0.002030698,0.00004233764,0.00187434],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001776999,"threshold_uncertainty_score":0.003922522,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01935680671915508,"score_gpt":0.2109827127481326,"score_spread":0.1916259060289775,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}