{"id":"W2993909982","doi":"10.1093/jas/skz258.426","title":"PSVI-15 Transcriptome analysis of ileal lymph nodes identifies key microRNAs affecting disease progression in Holstein cows with subclinical Johne’s disease","year":2019,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Paratuberculosis; Biology; microRNA; Transcriptome; Immune system; Fold change; Disease; Gene; Genetics; Gene expression; Mycobacterium; Internal medicine; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002263169,0.000177706,0.0003469217,0.0003991066,0.0002958324,0.0005716569,0.00009637102,0.0002605998,0.001067907],"category_scores_gemma":[0.0002245795,0.0001358393,0.000257093,0.0003112481,0.0001337453,0.0001210571,0.0002418546,0.0002397529,0.0002666024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002092235,"about_ca_system_score_gemma":0.000144822,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008948646,"about_ca_topic_score_gemma":0.00138177,"domain_scores_codex":[0.9998419,0.00001604423,0.000008490544,0.00005990974,0.00003442625,0.00003924345],"domain_scores_gemma":[0.9998639,0.00003519417,0.00004325904,0.000007655638,0.00002726945,0.00002269219],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001198598,0.0000415135,0.09009134,0.0001915595,0.00007827142,0.0002089781,0.0003753132,0.0002939785,0.8981168,0.00006436283,0.0003028881,0.009036443],"study_design_scores_gemma":[0.00002881573,0.0005168244,0.9261965,0.00004009289,0.0001849066,0.0007675278,0.0006366285,0.004327549,0.06292584,0.0001318039,0.004222212,0.00002127949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964544,0.00056238,0.000997297,0.00002035598,0.000007924127,0.000008392725,0.001585932,0.00002321084,0.0003400691],"genre_scores_gemma":[0.9928237,0.0002444854,0.00247835,0.0000630366,0.000007355889,0.00003244772,0.003161814,0.00001962841,0.001169204],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001067907,"threshold_uncertainty_score":0.003572524,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02212746531706702,"score_gpt":0.3486205182038758,"score_spread":0.3264930528868088,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}