{"id":"W2994165544","doi":"10.3389/fmicb.2019.02778","title":"Dispersal of Mycobacterium tuberculosis Driven by Historical European Trade in the South Pacific","year":2019,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Maurice Wilkins Centre for Molecular Biodiscovery; Lottery Health Research; Institute of Environmental Science and Research","keywords":"Biological dispersal; Viral phylodynamics; Clade; Biology; Population; Geography; Human migration; Indigenous; Ecology; Phylogenetics; Demography; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000647973,0.0001867706,0.0002517591,0.000624096,0.0009129681,0.001105978,0.0002504885,0.0004076928,0.00130445],"category_scores_gemma":[0.002345387,0.0001513805,0.0002561397,0.001182762,0.0007249853,0.0007471136,0.00116457,0.0006019808,0.0001574513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007019105,"about_ca_system_score_gemma":0.0006807892,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02688692,"about_ca_topic_score_gemma":0.03598002,"domain_scores_codex":[0.9997098,0.0000696841,0.00001568901,0.0001010686,0.00003459582,0.00006915547],"domain_scores_gemma":[0.9992115,0.0001273154,0.0003594594,0.00006305055,0.0001156089,0.0001228851],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002580521,0.00003001225,0.962,0.0001045722,0.0001393378,0.0007817748,0.003987229,0.0007835243,0.01176732,0.0008681898,0.0003644722,0.01891544],"study_design_scores_gemma":[0.00001034479,0.00003202015,0.9928474,0.00006020808,0.00005631966,0.0003512337,0.002367118,0.001011422,0.000407925,0.0004626021,0.002380576,0.00001280827],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976001,0.0005013681,0.0004734882,0.0001700602,0.000005584606,0.00000393217,0.0001279874,0.00000402846,0.001113342],"genre_scores_gemma":[0.9986548,0.0006003198,0.0003693946,0.00006162445,0.000007976853,0.000003998933,0.0001589198,0.000005343922,0.0001375482],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02688692,"threshold_uncertainty_score":0.05346084,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009828900846657346,"score_gpt":0.2371569528111072,"score_spread":0.2273280519644498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}