{"id":"W2994632914","doi":"10.1186/s13059-019-1905-y","title":"Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline","year":2019,"lang":"en","type":"article","venue":"Genome biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":1503,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"State of Iowa; Division of Molecular and Cellular Biosciences; Canada First Research Excellence Fund; U.S. Department of Agriculture; National Institute of Food and Agriculture; National Science Foundation","keywords":"Transposable element; Annotation; Biology; Genome; Retrotransposon; Pipeline (software); Computational biology; Benchmarking; Gene Annotation; Nanopore sequencing; Genomics; Computer science; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02582823205513527,"score_gpt":0.3080334568709841,"score_spread":0.2822052248158488,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}